RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SYNPOQ8N3V7 929 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 SMRP1Q8NCR6 262 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 EDEM1Q92611 657 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 TESCQ96BS2 214 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 BIRC7Q96CA5 298 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 CELF6Q96J87 481 aaKnown RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 GAD1Q99259 594 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 WDCPQ9H6R7 721 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 LIN28AQ9H9Z2 209 aaKnown RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 MPP6Q9NZW5 540 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 AKT3Q9Y243 479 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 BACE2Q9Y5Z0 518 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 UBXN8O00124 270 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 ADAM12O43184 909 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 GPIP06744 558 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 CDH15P55291 814 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 HYAL1Q12794 435 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 FADDQ13158 208 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 MED21Q13503 144 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 C18orf21Q32NC0 220 aaPredicted RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 FSCBQ5H9T9 825 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 PITRM1Q5JRX3 1037 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 CDKL4Q5MAI5 379 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 OR13C4Q8NGS5 318 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 OR6B3Q8NGW1 331 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 TIFAQ96CG3 184 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 CENPNQ96H22 339 aaPredicted RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 SCLYQ96I15 445 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 SLC6A18Q96N87 628 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 AICDAQ9GZX7 198 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 RNF38Q9H0F5 515 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 NOL11Q9H8H0 719 aaKnown RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 SPATA6Q9NWH7 488 aaPredicted RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 UBP1Q9NZI7 540 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 HCSTQ9UBK5 93 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 ENPP5Q9UJA9 477 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 ACAD8Q9UKU7 415 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 ATP11BQ9Y2G3 1177 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 PCDHGB3Q9Y5G1 929 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 AK5Q9Y6K8 562 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 KIAA1549Q9HCM3 1950 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 VPS13AQ96RL7 3174 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 A0A0J9YYE9 177 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 SLC35F4A4IF30 521 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 J3QRE1 110 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 GPR39O43194 453 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 B4GALT2O60909 372 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 GAAP10253 952 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 STMN1P16949 149 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 BMXP51813 675 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 PCBP3P57721 371 aaKnown RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 SPCS2Q15005 226 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 TTLL9Q3SXZ7 439 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 CARD16Q5EG05 197 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 MACC1Q6ZN28 852 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 CLYBLQ8N0X4 340 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 FAR2Q96K12 515 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 PPP1R2P1Q96PQ5 205 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 APOL2Q9BQE5 337 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 LHPPQ9H008 270 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 EFCAB1Q9HAE3 211 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 TRPV5Q9NQA5 729 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 NUP214P35658 2090 aaPredicted RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 LOC100653049A0A140TA62 436 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 E2F8A0AVK6 867 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 DYTNA2CJ06 578 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 HEATR9A2RTY3 570 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TRPC5OSA6NMA1 111 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 CDC7O00311 574 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 OR1I1O60431 355 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SNAP91O60641 907 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 MOSPD3O75425 235 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 RPP40O75818 363 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 KRT34O76011 436 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TRAF2Q12933 501 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TUBA3CQ13748 450 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 TAF1AQ15573 450 aaPredicted RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 AARS2Q5JTZ9 985 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 CPZQ66K79 652 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF773Q6PK81 442 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF783Q6ZMS7 281 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SPATA19Q7Z5L4 167 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 COMTD1Q86VU5 262 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 SMYD1Q8NB12 490 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 DBF4BQ8NFT6 615 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 HDAC10Q969S8 669 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ALPK1Q96QP1 1244 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 ADI1Q9BV57 179 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 PLCXD1Q9NUJ7 323 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 DNAAF2Q9NVR5 837 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 OAZ3Q9UMX2 235 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 PCDHGA10Q9Y5H3 936 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 MTMR11A4FU01 709 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 HNRNPRO43390 633 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 PQBP1O60828 265 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 CLASP2O75122 1294 aaKnown RBP7.68□□□□□ -1.18
CNOT4-201ENST00000315544 PGLSO95336 258 aa7.68□□□□□ -1.18
CNOT4-201ENST00000315544 UMPSP11172 480 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms