RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 RIC8BQ9NVN3 520 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 AIG1Q9NVV5 245 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 CFAP99D6REC4 459 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 K7EPI3 171 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 ANXA5P08758 320 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 ELFN1P0C7U0 828 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 TCN1P20061 433 aaPredicted RBP18■□□□□ 0.47
CCDC43-201ENST00000315286 MSH3P20585 1137 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 FCARP24071 287 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 FLOT2Q14254 428 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 ACOX1Q15067 660 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 ZNF284Q2VY69 593 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 TANGO2Q6ICL3 276 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 C8orf82Q6P1X6 216 aaPredicted RBP18■□□□□ 0.47
CCDC43-201ENST00000315286 UBE2R2Q712K3 238 aaPredicted RBP18■□□□□ 0.47
CCDC43-201ENST00000315286 ADGRG6Q86SQ4 1221 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 SFRP1Q8N474 314 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 DDHD1Q8NEL9 900 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 BTN2A2Q8WVV5 523 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 ASB11Q8WXH4 323 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 NAF1Q96HR8 494 aaKnown RBP18■□□□□ 0.47
CCDC43-201ENST00000315286 TEX37Q96LM6 180 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 WRAP53Q9BUR4 548 aaKnown RBP18■□□□□ 0.47
CCDC43-201ENST00000315286 C1orf50Q9BV19 199 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 ARL15Q9NXU5 204 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 MAP10Q9P2G4 905 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 CROTQ9UKG9 612 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 LRRK1Q38SD2 2015 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 EPOPA6NHQ4 379 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 H3BNX3 289 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 TRIM38O00635 465 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 PRNPP04156 253 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 PSMD8P48556 350 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 GTF2A1P52655 376 aaPredicted RBP18■□□□□ 0.47
CCDC43-201ENST00000315286 ERVK-8P63133 956 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 ABRAXAS2Q15018 415 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 HNRNPA1L2Q32P51 320 aaKnown RBP18■□□□□ 0.47
CCDC43-201ENST00000315286 PLEKHS1Q5SXH7 462 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 HACD2Q6Y1H2 254 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 SLC12A9Q9BXP2 914 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 PBX4Q9BYU1 374 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 SLC52A3Q9NQ40 469 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 GDE1Q9NZC3 331 aa18■□□□□ 0.47
CCDC43-201ENST00000315286 OR2AG2A6NM03 316 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 BBIP1A8MTZ0 92 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 ACOT8O14734 319 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 SPINT1O43278 529 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 SYNCRIPO60506 623 aaKnown RBP17.99■□□□□ 0.47
CCDC43-201ENST00000315286 STK16O75716 305 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 HMOX2P30519 316 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 MAGEA10P43363 369 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-201ENST00000315286 ATXN3P54252 364 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-201ENST00000315286 ZXDCQ2QGD7 858 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-201ENST00000315286 ATP6AP1LQ52LC2 224 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 BLOC1S3Q6QNY0 202 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 FNDC5Q8NAU1 212 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 PCYOX1LQ8NBM8 494 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 PPFIBP2Q8ND30 876 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 ELMO1Q92556 727 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 ARRDC3Q96B67 414 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 TIFAQ96CG3 184 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 AP2M1Q96CW1 435 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 LRCH3Q96II8 777 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 SLC39A3Q9BRY0 314 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 NKX2-4Q9H2Z4 354 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 PARVBQ9HBI1 364 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 SPAG4Q9NPE6 437 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 NDUFAF1Q9Y375 327 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 ANTXRLA6NF34 631 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 AP2A2O94973 939 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 C8GP07360 202 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 MPC1LP0DKB6 136 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 MRPL19P49406 292 aaKnown RBP17.99■□□□□ 0.47
CCDC43-201ENST00000315286 UFM1P61960 85 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 IRX1P78414 480 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-201ENST00000315286 GRIK2Q13002 908 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 ZNF234Q14588 700 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 METTL2BQ6P1Q9 378 aaKnown RBP17.99■□□□□ 0.47
CCDC43-201ENST00000315286 GPR149Q86SP6 731 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 DHDDSQ86SQ9 333 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 PIP4K2CQ8TBX8 421 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 ROPN1LQ96C74 230 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 RSRC1Q96IZ7 334 aaKnown RBP17.99■□□□□ 0.47
CCDC43-201ENST00000315286 BRINP2Q9C0B6 783 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 TRPV4Q9HBA0 871 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 THG1LQ9NWX6 298 aaKnown RBP17.99■□□□□ 0.47
CCDC43-201ENST00000315286 RNF11Q9Y3C5 154 aa17.99■□□□□ 0.47
CCDC43-201ENST00000315286 DOCK8Q8NF50 2099 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 EDDM13A0A1B0GTR0 161 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 PRORSD1PA6NEY8 169 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 LOC730098B7Z3J9 87 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 WNT9AO14904 365 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 ANGPT2O15123 496 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 KPNA5O15131 536 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 MAP3K7O43318 606 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 BCAS2O75934 225 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-201ENST00000315286 EPB42P16452 691 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 ZFP36L2P47974 494 aaKnown RBP17.98■□□□□ 0.47
CCDC43-201ENST00000315286 PIK3CGP48736 1102 aa17.98■□□□□ 0.47
CCDC43-201ENST00000315286 EIF4HQ15056 248 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms