RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 RIBC2Q9H4K1 309 aa13.25□□□□□ -0.29
CCDC13-201ENST00000310232 TFB2MQ9H5Q4 396 aaKnown RBP13.25□□□□□ -0.29
CCDC13-201ENST00000310232 ABCC13Q9NSE7 274 aa13.25□□□□□ -0.29
CCDC13-201ENST00000310232 SMPD4Q9NXE4 827 aa13.25□□□□□ -0.29
CCDC13-201ENST00000310232 ZNF229Q9UJW7 825 aa13.25□□□□□ -0.29
CCDC13-201ENST00000310232 CAB39Q9Y376 341 aaPredicted RBP13.25□□□□□ -0.29
CCDC13-201ENST00000310232 PRRC2BQ5JSZ5 2229 aaKnown RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 SYCE1LA8MT33 242 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 CXCL11O14625 94 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 PRMT5O14744 637 aaPredicted RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 GPR182O15218 404 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 RPP40O75818 363 aaKnown RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 UROSP10746 265 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 SLC2A4P14672 509 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 TGM1P22735 817 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 TCEA1P23193 301 aaKnown RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 SELENBP1Q13228 472 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 CRY1Q16526 586 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 SYT16Q17RD7 645 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 PAGE2Q7Z2X7 111 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 MSRB3Q8IXL7 192 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 ZNF555Q8NEP9 628 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 NETO1Q8TDF5 533 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 HDAC2Q92769 488 aaKnown RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 TINF2Q9BSI4 451 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 AMBNQ9NP70 447 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 ATAD3AQ9NVI7 634 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 COMMD10Q9Y6G5 202 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 RBM47A0AV96 593 aaKnown RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 TSPAN12O95859 305 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 LCKP06239 509 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 PABPC1P11940 636 aaKnown RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 PCSK1P29120 753 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 DCTP40126 519 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 ZNF846Q147U1 533 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 MAPRE1Q15691 268 aaKnown RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 SLC39A12Q504Y0 691 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 CEP68Q76N32 757 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 SPATA19Q7Z5L4 167 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 CYP4Z1Q86W10 505 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 PROSER1Q86XN7 944 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 ZCCHC7Q8N3Z6 543 aaKnown RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 OR4F6Q8NGB9 312 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 RHEBL1Q8TAI7 183 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 PNPT1Q8TCS8 783 aaKnown RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 RHBDF1Q96CC6 855 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 MAGED4Q96JG8 741 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 RPRD1AQ96P16 312 aaPredicted RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 BTBD2Q9BX70 525 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 RNF167Q9H6Y7 350 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 RMI1Q9H9A7 625 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 TAS2R13Q9NYV9 303 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 SCHIP1Q9P0W5 487 aaPredicted RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 TMEFF2Q9UIK5 374 aaPredicted RBP13.24□□□□□ -0.29
CCDC13-201ENST00000310232 MAGEL2Q9UJ55 1249 aa13.24□□□□□ -0.29
CCDC13-201ENST00000310232 NLRC5Q86WI3 1866 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 LOC285095A0A1B0GVY8 99 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 ZNF99A8MXY4 864 aaPredicted RBP13.23□□□□□ -0.29
CCDC13-201ENST00000310232 B4GALT3O60512 393 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 CHEK2O96017 543 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 SPNP16150 400 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 RAD51Q06609 339 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 VAC14Q08AM6 782 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 GTF2H3Q13889 308 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 BRMS1LQ5PSV4 323 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 VARS2Q5ST30 1063 aaKnown RBP13.23□□□□□ -0.29
CCDC13-201ENST00000310232 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 Q6ZPB1 254 aaPredicted RBP13.23□□□□□ -0.29
CCDC13-201ENST00000310232 GPR142Q7Z601 462 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 TLK2Q86UE8 772 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 ZNF598Q86UK7 904 aaKnown RBP13.23□□□□□ -0.29
CCDC13-201ENST00000310232 OR7D4Q8NG98 312 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 HMG20AQ9NP66 347 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 COMMD8Q9NX08 183 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 FKBPLQ9UIM3 349 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 KCNH4Q9UQ05 1017 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 PCDHB14Q9Y5E9 798 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 PCDHGC4Q9Y5F7 938 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 KRT87PA6NCN2 255 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 PSMD11O00231 422 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 PDHXO00330 501 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 NDUFS3O75489 264 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 ANGPTL1O95841 491 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 SERPINA1P01009 418 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 OR1E1P30953 314 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 NEK2P51955 445 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 ADAM17P78536 824 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 CDK5R2Q13319 367 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 CCL14Q16627 93 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 RBM48Q5RL73 367 aaKnown RBP13.23□□□□□ -0.29
CCDC13-201ENST00000310232 OVOS1Q6IE37 1185 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 MSANTD2Q6P1R3 559 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 CD300LGQ6UXG3 332 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 MBOAT1Q6ZNC8 495 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 B3GNT8Q7Z7M8 397 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 ADCK1Q86TW2 530 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 ARL10Q8N8L6 244 aa13.23□□□□□ -0.29
CCDC13-201ENST00000310232 ZNF548Q8NEK5 533 aaPredicted RBP13.23□□□□□ -0.29
CCDC13-201ENST00000310232 SLX1AQ9BQ83 275 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms