RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 G6PDP11413 515 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 IST1P53990 364 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ATXN7L2Q5T6C5 722 aaPredicted RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 C8orf82Q6P1X6 216 aaPredicted RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 MILR1Q7Z6M3 343 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ALPK1Q96QP1 1244 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ZIC5Q96T25 663 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 RIC8BQ9NVN3 520 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 NLE1Q9NVX2 485 aaPredicted RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 FNIP2Q9P278 1114 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 RABL2AQ9UBK7 228 aaPredicted RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 PCTPQ9UKL6 214 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 PCDHA9Q9Y5H5 950 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ASPDHA6ND91 283 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 DRGXA6NNA5 263 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 GNGT2O14610 69 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 MFN2O95140 757 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ALPIP09923 528 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 CKBP12277 381 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 HSD17B1P14061 328 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 POLR2IP36954 125 aaKnown RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 RPS9P46781 194 aaKnown RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 HSPA7P48741 367 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ERVPABLB-1P60509 514 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 KCNC4Q03721 635 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 PRKG2Q13237 762 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 FAM214AQ32MH5 1076 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ZBED5Q49AG3 693 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 RTP2Q5QGT7 225 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 LETMD1Q6P1Q0 360 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 TBPL2Q6SJ96 375 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 FAM151BQ6UXP7 276 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 TAS1R1Q7RTX1 841 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 CARNMT1Q8N4J0 409 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 OR10Q1Q8NGQ4 319 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 AIG1Q9NVV5 245 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 SQORQ9Y6N5 450 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 DLGAP1O14490 977 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ALBP02768 609 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 HPCAL1P37235 193 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 MAPKAPK2P49137 400 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 SELPLGQ14242 412 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 AP5B1Q2VPB7 878 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 TMTC4Q5T4D3 741 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 SKA2Q8WVK7 121 aaPredicted RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 CGREF1Q99674 301 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 TRIM39Q9HCM9 518 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 INTS10Q9NVR2 710 aaKnown RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 SMPD3Q9NY59 655 aaPredicted RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ABCD2Q9UBJ2 740 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.24□□□□□ -0.29
CTDP1-202ENST00000299543 KLHL3Q9UH77 587 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 ERVK-11Q9UQG0 969 aa13.24□□□□□ -0.29
CTDP1-202ENST00000299543 KPNA4O00629 521 aaPredicted RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 MLYCDO95822 493 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 EPOP01588 193 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 CAPNS1P04632 268 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 BMP1P13497 986 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 ZNF140P52738 457 aaPredicted RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 HMGCS1Q01581 520 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 IL1RL1Q01638 556 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 OCA2Q04671 838 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 LAPTM5Q13571 262 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 LCN8Q6JVE9 175 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 PRR23CQ6ZRP0 262 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 RASAL3Q86YV0 1011 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 GPR150Q8NGU9 434 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 UHRF1Q96T88 793 aaPredicted RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 CTRCQ99895 268 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 LTB4R2Q9NPC1 389 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 HACD3Q9P035 362 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 DNMT3LQ9UJW3 386 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 FCF1Q9Y324 198 aaKnown RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 TDRD15B5MCY1 1934 aaKnown RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 ANKRD66B4E2M5 251 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 PRAMEF12O95522 483 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 HOXB8P17481 243 aaPredicted RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 ELK4P28324 431 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 CORO1AP31146 461 aaKnown RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 BMPR1AP36894 532 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 CCT8P50990 548 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 RPL38P63173 70 aaKnown RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 MBTPS1Q14703 1052 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 TAF1AQ15573 450 aaPredicted RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 AASDHQ4L235 1098 aaPredicted RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 PYCR3Q53H96 274 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 SPATA19Q7Z5L4 167 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 TMEM173Q86WV6 379 aaPredicted RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 TMEM199Q8N511 208 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 NCLNQ969V3 563 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 PSKH2Q96QS6 385 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 NSUN3Q9H649 340 aaKnown RBP13.23□□□□□ -0.29
CTDP1-202ENST00000299543 PKD2L2Q9NZM6 624 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 LRFN2Q9ULH4 789 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 H0YJX3 145 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 TNFRSF10AO00220 468 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 ADAM12O43184 909 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 MAN1A2O60476 641 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms