RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 NDUFAF1Q9Y375 327 aa9.95□□□□□ -0.82
FOXN4-201ENST00000299162 SH3PXD2BA1X283 911 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 TOR1BO14657 336 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 TGM5O43548 720 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 LBPP18428 481 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 CDH3P22223 829 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 HNF1BP35680 557 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 NTHL1P78549 312 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 TRIM16LQ309B1 348 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ERI1Q8IV48 349 aaKnown RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 AHI1Q8N157 1196 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 CENPSQ8N2Z9 138 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 CPSF7Q8N684 471 aaKnown RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 SCAIQ8N9R8 606 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 GFM2Q969S9 779 aaKnown RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 PAWRQ96IZ0 340 aaKnown RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 COX4I2Q96KJ9 171 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ZNF599Q96NL3 588 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ZNF385DQ9H6B1 395 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 POLR1BQ9H9Y6 1135 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 FARSBQ9NSD9 589 aaKnown RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 SPG21Q9NZD8 308 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ZNF225Q9UK10 706 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 RNF11Q9Y3C5 154 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 AP4S1Q9Y587 144 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 VCANP13611 3396 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 FUOMA2VDF0 154 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 LCHNA4D1U4 455 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 A6NL46 340 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 PRMT5O14744 637 aaPredicted RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 PFDN6O15212 129 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 CXCL14O95715 111 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 FUCA1P04066 466 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 C8AP07357 584 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 PCNAP12004 261 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 AKT1P31749 480 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 HK2P52789 917 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 SMARCB1Q12824 385 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 TRIM25Q14258 630 aaKnown RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 CPSF6Q16630 551 aaKnown RBP eCLIP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 PHKG1Q16816 387 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 UGT3A2Q3SY77 523 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 DGKKQ5KSL6 1271 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 LETMD1Q6P1Q0 360 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 NCEH1Q6PIU2 408 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 GPRIN3Q6ZVF9 776 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 Q6ZVU0 165 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 RBM23Q86U06 439 aaKnown RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ZSWIM9Q86XI8 627 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 HJURPQ8NCD3 748 aaPredicted RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 OR2T11Q8NH01 316 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 CYB5D2Q8WUJ1 264 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 TADA1Q96BN2 335 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 C2orf49Q9BVC5 232 aaPredicted RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 WWOXQ9NZC7 414 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 KLQ9UEF7 1012 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 MOSPD1Q9UJG1 213 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 RAB26Q9ULW5 256 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 AXIN1O15169 862 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ATE1O95260 518 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 F11P03951 625 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 S100BP04271 92 aaPredicted RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 HMOX2P30519 316 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 COL9A2Q14055 689 aaPredicted RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 MAPRE2Q15555 327 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 RETSATQ6NUM9 610 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ADGRG6Q86SQ4 1221 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 DHFR2Q86XF0 187 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 SLC22A15Q8IZD6 547 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ADAMTS19Q8TE59 1207 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 HPS1Q92902 700 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ISOC1Q96CN7 298 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 LINC00597Q9H2U6 94 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 TFB2MQ9H5Q4 396 aaKnown RBP9.94□□□□□ -0.82
FOXN4-201ENST00000299162 ST14Q9Y5Y6 855 aa9.94□□□□□ -0.82
FOXN4-201ENST00000299162 NPIPB15A6NHN6 443 aaPredicted RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 SYCE1LA8MT33 242 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 DENRO43583 198 aaKnown RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 H6PDO95479 791 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 SLC2A4P14672 509 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 MAGP20916 626 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 NUP107P57740 925 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 KCNK10P57789 538 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 ERVPABLB-1P60509 514 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PPP1R8Q12972 351 aaKnown RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 TYSND1Q2T9J0 566 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PAGE3Q5JUK9 113 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 DEPDC1Q5TB30 811 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 NEK10Q6ZWH5 1172 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 TMEM25Q86YD3 366 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 BEND7Q8N7W2 519 aaPredicted RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PCYOX1LQ8NBM8 494 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 C2orf15Q8WU43 125 aaKnown RBP9.93□□□□□ -0.82
FOXN4-201ENST00000299162 SCAMP4Q969E2 229 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 L3HYPDHQ96EM0 354 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 PLEKHA8Q96JA3 519 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 DERL2Q9GZP9 239 aa9.93□□□□□ -0.82
FOXN4-201ENST00000299162 IPPKQ9H8X2 491 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms