RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 MARCH5Q9NX47 278 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 RIMKLBQ9ULI2 386 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 CORINQ9Y5Q5 1042 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 TYW5A2RUC4 315 aaKnown RBP23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 PTGES3LE9PB15 166 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 TAPBPO15533 448 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 C1QCP02747 245 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 GGT1P19440 569 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 SLC11A1P49279 550 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 GRIK2Q13002 908 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 FAM98BQ52LJ0 330 aaKnown RBP23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 SULT1C3Q6IMI6 304 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 ANKRD26P1Q6NSI1 321 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 GCNT7Q6ZNI0 430 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 FRS2Q8WU20 508 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 NCLNQ969V3 563 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 RNF38Q9H0F5 515 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 MUC13Q9H3R2 512 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 SLC30A1Q9Y6M5 507 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 G3V2T6 193 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 AXIN1O15169 862 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 XYLBO75191 536 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 PRKD3O94806 890 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 RAP2AP10114 183 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 MLLT10P55197 1068 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 TRAF3Q13114 568 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 FAM117BQ6P1L5 589 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 TMEM179BQ7Z7N9 219 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 CARNMT1Q8N4J0 409 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 ACDQ96AP0 544 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 GLT1D1Q96MS3 346 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 CSF3RQ99062 836 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 INVSQ9Y283 1065 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 NUP214P35658 2090 aaPredicted RBP23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 KRT87PA6NCN2 255 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 SYN3O14994 580 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 PRKAR2AP13861 404 aaKnown RBP23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 CCR3P51677 355 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 GPR17Q13304 367 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 PWP1Q13610 501 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 ATP1A4Q13733 1029 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 MRPL58Q14197 206 aaKnown RBP23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 ZDHHC13Q8IUH4 622 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 LIX1Q8N485 282 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 PDPRQ8NCN5 879 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 SLC13A3Q8WWT9 602 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 AMBRA1Q9C0C7 1298 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 SLC25A37Q9NYZ2 338 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 WARS2Q9UGM6 360 aaKnown RBP23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 ANGPTL3Q9Y5C1 460 aa23.97■■□□□ 1.43
SPTSSA-201ENST00000298130 PLXNA3P51805 1871 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 ANKRD36A6QL64 1941 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 ZBTB11O95625 1053 aaPredicted RBP23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 EOMESO95936 686 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 NFATC3Q12968 1075 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 XAF1Q6GPH4 301 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 RBM23Q86U06 439 aaKnown RBP23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 DPP10Q8N608 796 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 ADGRE3Q9BY15 652 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 HEBP1Q9NRV9 189 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 GMNNO75496 209 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 BMXP51813 675 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 FUT10Q6P4F1 479 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 SERPINA9Q86WD7 417 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 FAM162AQ96A26 154 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 COMMD8Q9NX08 183 aa23.96■■□□□ 1.43
SPTSSA-201ENST00000298130 C2orf78A6NCI8 922 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 ZDHHC11BP0C7U3 371 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 CRY1Q16526 586 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 MAPKAPK3Q16644 382 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 CTU2Q2VPK5 515 aaKnown RBP23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 ZNF773Q6PK81 442 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 MSRB3Q8IXL7 192 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 BCL7CQ8WUZ0 217 aaPredicted RBP23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 CDH7Q9ULB5 785 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 PKP3Q9Y446 797 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 PRMT5O14744 637 aaPredicted RBP23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 SEC22BO75396 215 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 SLC25A14O95258 325 aaPredicted RBP23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 IL1RL1Q01638 556 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 SUSD1Q6UWL2 747 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 OR13F1Q8NGS4 319 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 GTF2H4Q92759 462 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 CCDC90BQ9GZT6 254 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 NUDT4Q9NZJ9 180 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 AFF4Q9UHB7 1163 aaKnown RBP23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 DHRS7Q9Y394 339 aa23.95■■□□□ 1.42
SPTSSA-201ENST00000298130 C1orf232A0A0U1RR37 186 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 TMEM189-UBE2V1I3L0A0 370 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 HS6ST1O60243 411 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 STC2O76061 302 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 PARNO95453 639 aaKnown RBP23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 PRAMEF1O95521 474 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 ALDH2P05091 517 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 FSHRP23945 695 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 PTGER3P43115 390 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 CCSAPQ6IQ19 270 aaPredicted RBP23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 CXorf57Q6NSI4 855 aaKnown RBP23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 SMYD1Q8NB12 490 aa23.94■■□□□ 1.42
SPTSSA-201ENST00000298130 GFM2Q969S9 779 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms