RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ITGA1P56199 1179 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 RTP2Q5QGT7 225 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 MRPL10Q7Z7H8 261 aaKnown RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 CDCA3Q99618 268 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 FETUBQ9UGM5 382 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 MBLAC1A4D2B0 266 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 TOP3BO95985 862 aaKnown RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 LRRC66Q68CR7 880 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 TXNRD3NBQ6F5E7 133 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 ALYREFQ86V81 257 aaKnown RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 GRIP2Q9C0E4 1043 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 C1orf109Q9NX04 203 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 DHRS12A0PJE2 317 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 ZNF840PA6NDX5 716 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 NPHS1O60500 1241 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 PSMG1O95456 288 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 NRG1Q02297 640 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 TRIM71Q2Q1W2 868 aaKnown RBP17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 UBR7Q8N806 425 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 OR10T2Q8NGX3 314 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 RAB7BQ96AH8 199 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 GAL3ST4Q96RP7 486 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 GATA5Q9BWX5 397 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 SLC2A11Q9BYW1 496 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 RACGAP1Q9H0H5 632 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 LGALS13Q9UHV8 139 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 COQ6Q9Y2Z9 468 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 CA3P07451 260 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 DRD4P21917 467 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 ALKBH2Q6NS38 261 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 TRMT10BQ6PF06 316 aaKnown RBP17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 SMPDL3AQ92484 453 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 RTKNQ9BST9 563 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 GMPPBQ9Y5P6 360 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 SOCS5O75159 536 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 NIPSNAP2O75323 286 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 TNFAIP8O95379 198 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 KLF10Q13118 480 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 TOP3AQ13472 1001 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 GCNT6Q5T4J0 391 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 CLEC6AQ6EIG7 209 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 SERHL2Q9H4I8 314 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 USP29Q9HBJ7 922 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 CD248Q9HCU0 757 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 SERHLQ9NQF3 203 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 OR51F1A6NGY5 319 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 FOSL2P15408 326 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 TIMM50Q3ZCQ8 353 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 ZC3H3Q8IXZ2 948 aaKnown RBP17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 SHISA4Q96DD7 197 aa17.43■□□□□ 0.38
CDC42EP3-201ENST00000295324 MTX2O75431 263 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 UGT2B17O75795 530 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 IFNGP01579 166 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 PRG2P13727 222 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 KRR1Q13601 381 aaKnown RBP17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 RFX4Q33E94 735 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 TTC24A2A3L6 582 aaPredicted RBP17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 EPOP01588 193 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 GRIA2P42262 883 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 OGDHQ02218 1023 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 PAQR3Q6TCH7 311 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 RTL4Q6ZR62 310 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 ST13P5Q8NFI4 369 aaPredicted RBP17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 TMEM40Q8WWA1 233 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 C8orf33Q9H7E9 229 aaPredicted RBP17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 ERVK-11Q9UQG0 969 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 LATS1O95835 1130 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 IL6P05231 212 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 PRAMEF14Q5SWL7 426 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 PRAMEF13Q5VWM6 474 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 SIX5Q8N196 739 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 FBXW8Q8N3Y1 598 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 NAT8LQ8N9F0 302 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 PPM1MQ96MI6 270 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 CBSLP0DN79 551 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 ZNF8P17098 575 aaPredicted RBP17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 CBSP35520 551 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 ZNF460Q14592 562 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 PHF19Q5T6S3 580 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 ERN2Q76MJ5 926 aaKnown RBP17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 CPNE8Q86YQ8 564 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 FAM83CQ9BQN1 747 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 TDRD1Q9BXT4 1180 aaKnown RBP17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 PACSIN3Q9UKS6 424 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 IKZF3Q9UKT9 509 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 RGPD2P0DJD1 1756 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 TCF4P15884 667 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 ARMCX4Q5H9R4 360 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 CAMKVQ8NCB2 501 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 ADCY4Q8NFM4 1077 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 LMX1AQ8TE12 382 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 TFGQ92734 400 aaPredicted RBP17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 RIT1Q92963 219 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 TOX2Q96NM4 488 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 B4GALT6Q9UBX8 382 aa17.42■□□□□ 0.38
CDC42EP3-201ENST00000295324 MLLT3P42568 568 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 SLC9B2Q86UD5 537 aa17.41■□□□□ 0.38
CDC42EP3-201ENST00000295324 TBC1D10AQ9BXI6 508 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms