RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 IL6P05231 212 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 UROSP10746 265 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 TNNI3P19429 210 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 GNPDA1P46926 289 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 ACTR3P61158 418 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 ATP6V0D1P61421 351 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 CSNK2BP67870 215 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 ADGRE1Q14246 886 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 RFX4Q33E94 735 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 ADGRF1Q5T601 910 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 CCDC149Q6ZUS6 474 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 RNF175Q8N4F7 328 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 PSMA8Q8TAA3 256 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 ACTRT2Q8TDY3 377 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 XAGE5Q8WWM1 108 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 ART5Q96L15 291 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 CCDC106Q9BWC9 280 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 MAGEH1Q9H213 219 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 FANCEQ9HB96 536 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 GMPR2Q9P2T1 348 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 RPL26L1Q9UNX3 145 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 KLHL20Q9Y2M5 609 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 COL11A2P13942 1736 aaPredicted RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 MYOFQ9NZM1 2061 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 H3BSH0 61 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 NUDT14O95848 222 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 CSF2RAP15509 400 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 SERPINB1P30740 379 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 FOXA1P55317 472 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 RUNX1T1Q06455 604 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 GRM2Q14416 872 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 CNPY1Q3B7I2 92 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 KIAA0930Q6ICG6 404 aaPredicted RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 TNFAIP8L2Q6P589 184 aaPredicted RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 TSPAN33Q86UF1 283 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 CNTD1Q8N815 330 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 OR52B6Q8NGF0 335 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 OLIG1Q8TAK6 271 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 ZCCHC10Q8TBK6 192 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 SMG7Q92540 1137 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 LRRC58Q96CX6 371 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 ASB2Q96Q27 587 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 SLC9A7Q96T83 725 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 GORASP1Q9BQQ3 440 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 RIOK2Q9BVS4 552 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 C11orf16Q9NQ32 467 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 MTMR10Q9NXD2 777 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 SIRPGQ9P1W8 387 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 FBXW2Q9UKT8 454 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 GLOD5A6NK44 160 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 BHMG1C9JSJ3 638 aaPredicted RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 GNB5O14775 395 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 TPD52L2O43399 206 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 OR10H3O60404 316 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 RPLP2P05387 115 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 NR2F1P10589 423 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 PDE12Q6L8Q7 609 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 AHSA2Q719I0 299 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 PIK3C3Q8NEB9 887 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 PROX1Q92786 737 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 TRMT61BQ9BVS5 477 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 CLK4Q9HAZ1 481 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 ZBTB26Q9HCK0 441 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 SSU72Q9NP77 194 aaKnown RBP4.71□□□□□ -1.66
UBR1-201ENST00000290650 HCFC1R1Q9NWW0 138 aa4.71□□□□□ -1.66
UBR1-201ENST00000290650 A0A087WXM4 84 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 A0A088AWK7 358 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 SLC28A1O00337 649 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 GRM6O15303 877 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 ADAM12O43184 909 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 APOA1P02647 267 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 ANXA4P09525 319 aaPredicted RBP4.7□□□□□ -1.66
UBR1-201ENST00000290650 GNAZP19086 355 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 IMPDH1P20839 514 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 TIE1P35590 1138 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 EIF2B2P49770 351 aaKnown RBP4.7□□□□□ -1.66
UBR1-201ENST00000290650 SEPHS1P49903 392 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 MPPE1Q53F39 396 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 OR4F3Q6IEY1 312 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 ZNF605Q86T29 641 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 PHC3Q8NDX5 983 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 ZMIZ2Q8NF64 920 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 PHF10Q8WUB8 498 aaKnown RBP4.7□□□□□ -1.66
UBR1-201ENST00000290650 NRG4Q8WWG1 115 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 ZFRQ96KR1 1074 aaKnown RBP4.7□□□□□ -1.66
UBR1-201ENST00000290650 OSBPL2Q9H1P3 480 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 SMURF2Q9HAU4 748 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 PALMDQ9NP74 551 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 PNPLA8Q9NP80 782 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 STK39Q9UEW8 545 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 RSL24D1Q9UHA3 163 aaKnown RBP4.7□□□□□ -1.66
UBR1-201ENST00000290650 TBC1D30Q9Y2I9 924 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 TSC22D4Q9Y3Q8 395 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 NME7Q9Y5B8 376 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 A0A1B0GVG6 124 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 ALDH1A2O94788 518 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 UMPSP11172 480 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 CCL5P13501 91 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 KCNA5P22460 613 aa4.7□□□□□ -1.66
UBR1-201ENST00000290650 TMED10P49755 219 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms