RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CRATP43155 626 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ARSDP51689 593 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 DIO3P55073 304 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 RAB25P57735 213 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 OR2B6P58173 313 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ST8SIA6P61647 398 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 MS4A2Q01362 244 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 IRF8Q02556 426 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 NDUFAF6Q330K2 333 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF829Q3KNS6 432 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 COLEC12Q5KU26 742 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 MARCH8Q5T0T0 291 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 STEAP4Q687X5 459 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF544Q6NX49 715 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC24A5Q71RS6 500 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 PDPRQ8NCN5 879 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 RPL10LQ96L21 214 aaKnown RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 GSDMCQ9BYG8 508 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 OSBPL2Q9H1P3 480 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 TMLHEQ9NVH6 421 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 PGAP2Q9UHJ9 254 aa12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 FBXO9Q9UK97 447 aaPredicted RBP12.38□□□□□ -0.43
SLC6A1-201ENST00000287766 NUP205Q92621 2012 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 FAM172BPA6NC97 362 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 PRMT5O14744 637 aaPredicted RBP12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 PRSS56P0CW18 603 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 CAPZA2P47755 286 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 HCAR3P49019 387 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 PTPN5P54829 565 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 SULT2A1Q06520 285 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ZBED5Q49AG3 693 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 CHST15Q7LFX5 561 aaPredicted RBP12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF598Q86UK7 904 aaKnown RBP12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 CDKN2AIPNLQ96HQ2 116 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 MTRRQ9UBK8 725 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 GTF2IRD1Q9UHL9 959 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 TNPO3Q9Y5L0 923 aaKnown RBP12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 CASKO14936 926 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 AP2A2O94973 939 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF806P0C7X5 589 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ITIH1P19827 911 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ACLYP53396 1101 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 SCN1BQ07699 218 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ACSM2AQ08AH3 577 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ILF2Q12905 390 aaKnown RBP12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 PARP15Q460N3 678 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ACSM2BQ68CK6 577 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 TMPRSS11AQ6ZMR5 421 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF280BQ86YH2 543 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 GPR65Q8IYL9 337 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 CLDN19Q8N6F1 224 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 BRSK1Q8TDC3 778 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 TLE6Q9H808 572 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 A0A0U1RQS6 177 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 BCKDKO14874 412 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 UGT2B4P06133 528 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 CAPGP40121 348 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 GSTM5P46439 218 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 HERVK_113P63132 956 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 GRB14Q14449 540 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 MZT2AQ6P582 158 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC22A16Q86VW1 577 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ARMC8Q8IUR7 673 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 OR10A6Q8NH74 314 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ANKRD49Q8WVL7 239 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 KHSRPQ92945 711 aaKnown RBP eCLIP12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ASB9Q96DX5 294 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC2A13Q96QE2 648 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ERVK-6Q9BXR3 956 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ATG10Q9H0Y0 220 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 ITM2CQ9NQX7 267 aa12.37□□□□□ -0.43
SLC6A1-201ENST00000287766 A0A0D9SEW6 157 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 FAM92AA1XBS5 289 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 OTCP00480 354 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ITGB1P05556 798 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ANXA5P08758 320 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 CTSKP43235 329 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 STT3AP46977 705 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 MAPKAPK2P49137 400 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 AGTR2P50052 363 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 HMGCS1Q01581 520 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ADAMTSL2Q86TH1 951 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 PROSER1Q86XN7 944 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 PHF10Q8WUB8 498 aaKnown RBP12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 C11orf24Q96F05 449 aaPredicted RBP12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 APOLD1Q96LR9 279 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 EHD1Q9H4M9 534 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ADAMTSL1Q8N6G6 1762 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 MYADML2A6NDP7 307 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 NOBOXO60393 691 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ALDH1A2O94788 518 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 NR2F6P10588 404 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 COX7A2P14406 83 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 GJA5P36382 358 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 MERTKQ12866 999 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ABRQ12979 859 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 TAZQ16635 292 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 C3orf58Q8NDZ4 430 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms