RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 MANSC1Q9H8J5 431 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 TSR3Q9UJK0 312 aaKnown RBP18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 NPEPPSL1A6NEC2 478 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 TNFRSF10AO00220 468 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 KLF11O14901 512 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 MPC1LP0DKB6 136 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 BGNP21810 368 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 ALDH3A1P30838 453 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 PREPP48147 710 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 KCNC1P48547 511 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 SRP54P61011 504 aaKnown RBP18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 DMPKQ09013 629 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 PMS2CLQ68D20 193 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 ARMCX6Q7L4S7 300 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 NUDCD3Q8IVD9 361 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 SLC22A15Q8IZD6 547 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 TSACCQ96A04 125 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 DPEP2Q9H4A9 486 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 MID2Q9UJV3 735 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 PNMA8BQ9ULN7 279 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 GPSM3Q9Y4H4 160 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 DGKBQ9Y6T7 804 aa18.53■□□□□ 0.56
PDLIM3-202ENST00000284770 ABCA7Q8IZY2 2146 aa18.52■□□□□ 0.56
PDLIM3-202ENST00000284770 HRO43593 1189 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 WNT1P04628 370 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 ACP5P13686 325 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 CPA3P15088 417 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 VCLP18206 1134 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 PDHA2P29803 388 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 CNR2P34972 360 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 RPA4Q13156 261 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 ALG11Q2TAA5 492 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 CES4AQ5XG92 561 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 METRNLQ641Q3 311 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 FAM83HQ6ZRV2 1179 aaPredicted RBP18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 SKA2Q8WVK7 121 aaPredicted RBP18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 OR2M4Q96R27 311 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 ATOH8Q96SQ7 321 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 FAM107BQ9H098 131 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 SLCO1B3Q9NPD5 702 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 KLC4Q9NSK0 619 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 FGFR1OP2Q9NVK5 253 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 DNAJC16Q9Y2G8 782 aa18.52■□□□□ 0.55
PDLIM3-202ENST00000284770 H3BM21 787 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 KERAO60938 352 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 KCNA4P22459 653 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 FZD2Q14332 565 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 RD3Q7Z3Z2 195 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 ADAMTSL2Q86TH1 951 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 C10orf107Q8IVU9 208 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 RAB3IL1Q8TBN0 382 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 ZSCAN32Q9NX65 697 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 RNF112Q9ULX5 631 aa18.51■□□□□ 0.55
PDLIM3-202ENST00000284770 TLR4O00206 839 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 NDUFAB1O14561 156 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 BCAT2O15382 392 aaPredicted RBP18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 MATN4O95460 622 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 SP9P0CG40 484 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 MYL2P10916 166 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 FGF3P11487 239 aaPredicted RBP18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 EIF2B5Q13144 721 aaKnown RBP18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 LRP8Q14114 963 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ANGPT1Q15389 498 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 CHI3L2Q15782 390 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 PLK5Q496M5 336 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 LYSMD4Q5XG99 296 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 SBSNQ6UWP8 590 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ZYG11AQ6WRX3 759 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 CPLX4Q7Z7G2 160 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 HID1Q8IV36 788 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 TRIM42Q8IWZ5 723 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ZNF473Q8WTR7 871 aaKnown RBP18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ASB11Q8WXH4 323 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 C11orf16Q9NQ32 467 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ADAMTS6Q9UKP5 1117 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ACSL5Q9ULC5 683 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 PLEKHM1Q9Y4G2 1056 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 CEP192Q8TEP8 1941 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 FAM86C2PA6NEL3 165 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 PRR19A6NJB7 356 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 SYCE1LA8MT33 242 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 TNFP01375 233 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 C8GP07360 202 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ITPKAP23677 461 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 MAPK9P45984 424 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 DHPSP49366 369 aaPredicted RBP18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 HK3P52790 923 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 FAM47EQ6ZV65 393 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 PARGQ86W56 976 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ZBTB44Q8NCP5 570 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 OR6Y1Q8NGX8 325 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ZC3H10Q96K80 434 aaKnown RBP18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 OR52A5Q9H2C5 316 aa18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 TRNAU1APQ9NX07 287 aaKnown RBP18.5■□□□□ 0.55
PDLIM3-202ENST00000284770 ANKRD12Q6UB98 2062 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 GFYI3L273 518 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 SLC16A5O15375 505 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 DLX3O60479 287 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 EDF1O60869 148 aaKnown RBP18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 NEFHP12036 1026 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms