RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 IKZF3Q9UKT9 509 aa12.72□□□□□ -0.37
C9orf3-201ENST00000277198 ST14Q9Y5Y6 855 aa12.72□□□□□ -0.37
C9orf3-201ENST00000277198 FAM149AA5PLN7 773 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 NPEPPSL1A6NEC2 478 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 FAM86C2PA6NEL3 165 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 EI24O14681 340 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 PRSS23O95084 383 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 C1RP00736 705 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 HMBSP08397 361 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 CDH1P12830 882 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 HOXB6P17509 224 aaKnown RBP12.71□□□□□ -0.37
C9orf3-201ENST00000277198 MSH3P20585 1137 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 RBBP7Q16576 425 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 LILRA6Q6PI73 481 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 RNF165Q6ZSG1 346 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 CHST9Q7L1S5 443 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 FAM110BQ8TC76 370 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 CD200R1Q8TD46 325 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 TEX37Q96LM6 180 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 RDH12Q96NR8 316 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 C19orf43Q9BQ61 176 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 OSBPL6Q9BZF3 934 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 TMEM9Q9P0T7 183 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 GALPQ9UBC7 116 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 MUTYHQ9UIF7 546 aa12.71□□□□□ -0.37
C9orf3-201ENST00000277198 MTMR11A4FU01 709 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 TRIM64BA6NI03 449 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 ANKRD66B4E2M5 251 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 SYNCRIPO60506 623 aaKnown RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 TPST1O60507 370 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 DEAF1O75398 565 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 NELFEP18615 380 aaKnown RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 DCKP27707 260 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 PRDX3P30048 256 aaKnown RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 OR1D2P34982 312 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 ATP5C1P36542 298 aaKnown RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 SCNN1BP51168 640 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CDH15P55291 814 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 ADARB1P78563 741 aaKnown RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 ECT2LQ008S8 904 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 TGFBIQ15582 683 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CCNYL2Q5T2Q4 361 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 ADAMTSL2Q86TH1 951 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CARNMT1Q8N4J0 409 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 FNDC5Q8NAU1 212 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 OR8J3Q8NGG0 315 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 OR2T11Q8NH01 316 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CYGBQ8WWM9 190 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 OVCA2Q8WZ82 227 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 BIRC7Q96CA5 298 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 MYEOVQ96EZ4 313 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 NSMCE2Q96MF7 247 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CHID1Q9BWS9 393 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 PHF7Q9BWX1 381 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 NPLQ9BXD5 320 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 RPF2Q9H7B2 306 aaKnown RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 PLGRKTQ9HBL7 147 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 GALNT8Q9NY28 637 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CD274Q9NZQ7 290 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 AGO1Q9UL18 857 aaKnown RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 AP3M1Q9Y2T2 418 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 PCDHB1Q9Y5F3 818 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 LOC730098B7Z3J9 87 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 C9JVG2 144 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 PRSS56P0CW18 603 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 MTHFD1P11586 935 aaKnown RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 UGT1A6P19224 532 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 JAK1P23458 1154 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 MC4RP32245 332 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 AGTR2P50052 363 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 HLCSP50747 726 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 RAB15P59190 212 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 ELAVL2Q12926 359 aaKnown RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 EPS8Q12929 822 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CTSL3PQ5NE16 218 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CERS6Q6ZMG9 384 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 Q6ZSR9 355 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 IFNEQ86WN2 208 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CLVS1Q8IUQ0 354 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 RIMKLAQ8IXN7 391 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 OR7D4Q8NG98 312 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 GPR152Q8TDT2 470 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF707Q96C28 371 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 LINGO1Q96FE5 620 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CCDC115Q96NT0 180 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 SLC30A3Q99726 388 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CCSER2Q9H7U1 834 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 SFXN1Q9H9B4 322 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 CXorf21Q9HAI6 301 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 C11orf16Q9NQ32 467 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 DZANK1Q9NVP4 752 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 MTRRQ9UBK8 725 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 ZFP37Q9Y6Q3 630 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-201ENST00000277198 ANKRD36A6QL64 1941 aa12.7□□□□□ -0.38
C9orf3-201ENST00000277198 C2orf16Q68DN1 1984 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 WDFY4Q6ZS81 3184 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 C2CD4DB7Z1M9 353 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 E5RI56 91 aa12.69□□□□□ -0.38
C9orf3-201ENST00000277198 H7C4K7 107 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms