RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 TMEM39BQ9GZU3 492 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 C3orf14Q9HBI5 128 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 MOCS1Q9NZB8 636 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 CDH8P55286 799 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 ZC3H12AQ5D1E8 599 aaKnown RBP11.03□□□□□ -0.64
CHFR-201ENST00000266880 XRRA1Q6P2D8 792 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 MARCH9Q86YJ5 346 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 NAT16Q8N8M0 369 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 TWIST2Q8WVJ9 160 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 PMEPA1Q969W9 287 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 TCEAL4Q96EI5 215 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 AGO4Q9HCK5 861 aaKnown RBP11.03□□□□□ -0.64
CHFR-201ENST00000266880 PLLPQ9Y342 182 aa11.03□□□□□ -0.64
CHFR-201ENST00000266880 ARSKQ6UWY0 536 aa11.02□□□□□ -0.64
CHFR-201ENST00000266880 CEP97Q8IW35 865 aa11.02□□□□□ -0.64
CHFR-201ENST00000266880 ESX1Q8N693 406 aa11.02□□□□□ -0.64
CHFR-201ENST00000266880 DAGLBQ8NCG7 672 aa11.02□□□□□ -0.64
CHFR-201ENST00000266880 KCNN3Q9UGI6 736 aa11.02□□□□□ -0.64
CHFR-201ENST00000266880 IQCF5A8MTL0 148 aa11.02□□□□□ -0.64
CHFR-201ENST00000266880 FGF10O15520 208 aaPredicted RBP11.02□□□□□ -0.64
CHFR-201ENST00000266880 TAF1CQ15572 869 aaPredicted RBP11.02□□□□□ -0.64
CHFR-201ENST00000266880 CARD16Q5EG05 197 aa11.02□□□□□ -0.64
CHFR-201ENST00000266880 CORO1BQ9BR76 489 aa11.02□□□□□ -0.64
CHFR-201ENST00000266880 LRTM1Q9HBL6 345 aa11.02□□□□□ -0.64
CHFR-201ENST00000266880 BOLA2-SMG1P6H3BVE0 249 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 TGDSO95455 350 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 MAP3K8P41279 467 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 CAV3P56539 151 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 TRABD2AQ86V40 505 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 C12orf65Q9H3J6 166 aaKnown RBP11.02□□□□□ -0.65
CHFR-201ENST00000266880 SMIM30A4D0T7 59 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 PAEPP09466 180 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 ATG4CQ96DT6 458 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 C7orf34Q96L11 122 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 AGAP5A6NIR3 686 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 ZNF878C9JN71 531 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 GALNT1Q10472 559 aaPredicted RBP11.02□□□□□ -0.65
CHFR-201ENST00000266880 PUM1Q14671 1186 aaKnown RBP eCLIP11.02□□□□□ -0.65
CHFR-201ENST00000266880 RETSATQ6NUM9 610 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 MIR1-1HGQ9H1L0 117 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 ARHGEF5Q12774 1597 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 HSBP1L1C9JCN9 74 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 HOXB6P17509 224 aaKnown RBP11.02□□□□□ -0.65
CHFR-201ENST00000266880 RAB4BP61018 213 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 ZNF792Q3KQV3 632 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 CIDECQ96AQ7 238 aaPredicted RBP11.02□□□□□ -0.65
CHFR-201ENST00000266880 ERVK-11Q9UQG0 969 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 S100PP25815 95 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 SLC6A9P48067 706 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 RGS6P49758 472 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 FAM46CQ5VWP2 391 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 RANBP3LQ86VV4 465 aaPredicted RBP11.02□□□□□ -0.65
CHFR-201ENST00000266880 RIMKLBQ9ULI2 386 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 CXCR6O00574 342 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 ADAMDEC1O15204 470 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 ICAM1P05362 532 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 SLC15A1P46059 708 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 TSTQ16762 297 aaKnown RBP11.02□□□□□ -0.65
CHFR-201ENST00000266880 ANGEL2Q5VTE6 544 aaKnown RBP11.02□□□□□ -0.65
CHFR-201ENST00000266880 TDRPQ86YL5 185 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 FAM156AQ8NDB6 213 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 VCPIP1Q96JH7 1222 aa11.02□□□□□ -0.65
CHFR-201ENST00000266880 M0R233 179 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 ENTPD6O75354 484 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 SLC16A8O95907 504 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 FGBP02675 491 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
CHFR-201ENST00000266880 ETFRF1Q6IPR1 90 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 KLHL36Q8N4N3 616 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 ZFAND2BQ8WV99 257 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 CNDP2Q96KP4 475 aaKnown RBP11.01□□□□□ -0.65
CHFR-201ENST00000266880 SLC30A2Q9BRI3 323 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 SNRNP200O75643 2136 aaKnown RBP11.01□□□□□ -0.65
CHFR-201ENST00000266880 NUDT17P0C025 328 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 KIR3DL1P43629 444 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 LARS2Q15031 903 aaKnown RBP11.01□□□□□ -0.65
CHFR-201ENST00000266880 LZTR1Q8N653 840 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 TREX2Q9BQ50 279 aaPredicted RBP11.01□□□□□ -0.65
CHFR-201ENST00000266880 CDT1Q9H211 546 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 TRPS1Q9UHF7 1281 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 PCYT1BQ9Y5K3 369 aaPredicted RBP11.01□□□□□ -0.65
CHFR-201ENST00000266880 CDH1P12830 882 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 TSHRP16473 764 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 APLP1P51693 650 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 ZNF674Q2M3X9 581 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 CLEC12AQ5QGZ9 265 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 C9orf64Q5T6V5 341 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 GTF2IRD2BQ6EKJ0 949 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 ARL9Q6T311 187 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 GTF2IRD2Q86UP8 949 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 CENPSQ8N2Z9 138 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 LENG9Q96B70 501 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 ZFYVE16Q7Z3T8 1539 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 CAPN14A8MX76 684 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 FBP2O00757 339 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 IQCCQ4KMZ1 466 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 CHST13Q8NET6 341 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 HDAC10Q969S8 669 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 SEMA3CQ99985 751 aa11.01□□□□□ -0.65
CHFR-201ENST00000266880 ILVBLA1L0T0 632 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms