RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MZB1Q8WU39 189 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 UBLCP1Q8WVY7 318 aaPredicted RBP13.97□□□□□ -0.17
SSBP1-201ENST00000265304 ELMO1Q92556 727 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 UBXN10Q96LJ8 280 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 GPR21Q99679 349 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 SLC30A3Q99726 388 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 UCK1Q9HA47 277 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 NCKIPSDQ9NZQ3 722 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 KCNK6Q9Y257 313 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 U3KQA8 63 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 CFAP54Q96N23 3096 aa13.97□□□□□ -0.17
SSBP1-201ENST00000265304 C4orf47A7E2U8 309 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 GDF9O60383 454 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 SDC3O75056 442 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 KRT38O76015 456 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 SHBGP04278 402 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 INHBAP08476 426 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 ALPPL2P10696 532 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 SLC2A4P14672 509 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 PNLIPP16233 465 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 CHRM3P20309 590 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 PDHA2P29803 388 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 CLCA4Q14CN2 919 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 INAVAQ3KP66 663 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 AASDHQ4L235 1098 aaPredicted RBP13.96□□□□□ -0.17
SSBP1-201ENST00000265304 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.96□□□□□ -0.17
SSBP1-201ENST00000265304 LRRC8EQ6NSJ5 796 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 SLC30A9Q6PML9 568 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 TMEM207Q6UWW9 146 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 ZNF438Q7Z4V0 828 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 GLRX5Q86SX6 157 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 PDZD3Q86UT5 571 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 GATAD2AQ86YP4 633 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 VRK3Q8IV63 474 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 CEP97Q8IW35 865 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 RIBC1Q8N443 379 aaPredicted RBP13.96□□□□□ -0.17
SSBP1-201ENST00000265304 FBXO15Q8NCQ5 510 aaPredicted RBP13.96□□□□□ -0.17
SSBP1-201ENST00000265304 TMEM159Q96B96 161 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 MTBPQ96DY7 904 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 TSPAN17Q96FV3 270 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 NDNQ99608 321 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 SARS2Q9NP81 518 aaKnown RBP13.96□□□□□ -0.17
SSBP1-201ENST00000265304 PRDM8Q9NQV8 689 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 SCHIP1Q9P0W5 487 aaPredicted RBP13.96□□□□□ -0.17
SSBP1-201ENST00000265304 ZNF624Q9P2J8 865 aaPredicted RBP13.96□□□□□ -0.17
SSBP1-201ENST00000265304 WDR37Q9Y2I8 494 aa13.96□□□□□ -0.17
SSBP1-201ENST00000265304 SNRNP200O75643 2136 aaKnown RBP13.96□□□□□ -0.18
SSBP1-201ENST00000265304 CCDC189A1A4V9 331 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 E5RI56 91 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 GFYI3L273 518 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 SIGLEC6O43699 453 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 CDH16O75309 829 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 KRT37O76014 449 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 ALDOAP04075 364 aaKnown RBP13.95□□□□□ -0.18
SSBP1-201ENST00000265304 SNRPAP09012 282 aaKnown RBP13.95□□□□□ -0.18
SSBP1-201ENST00000265304 MPC1LP0DKB6 136 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 CKMT1AP12532 417 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 ZNF37AP17032 561 aaPredicted RBP13.95□□□□□ -0.18
SSBP1-201ENST00000265304 CRABP2P29373 138 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 SLC19A1P41440 591 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 ABCG1P45844 678 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 MAPK9P45984 424 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 TMED2Q15363 201 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 DEFB133Q30KQ1 61 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 TTLL9Q3SXZ7 439 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 LGSNQ5TDP6 509 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 PAQR3Q6TCH7 311 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 SH2D5Q6ZV89 423 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 RBM12BQ8IXT5 1001 aaKnown RBP13.95□□□□□ -0.18
SSBP1-201ENST00000265304 SLC35F3Q8IY50 421 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 ARL10Q8N8L6 244 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 OR6C4Q8NGE1 309 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 UHMK1Q8TAS1 419 aaKnown RBP13.95□□□□□ -0.18
SSBP1-201ENST00000265304 NETO1Q8TDF5 533 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 ASB11Q8WXH4 323 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 RMDN2Q96LZ7 410 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 INSM2Q96T92 566 aaPredicted RBP13.95□□□□□ -0.18
SSBP1-201ENST00000265304 SYTL2Q9HCH5 934 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 LGALS13Q9UHV8 139 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 BTBD3Q9Y2F9 522 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 DNAJC16Q9Y2G8 782 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 HEATR5BQ9P2D3 2071 aa13.95□□□□□ -0.18
SSBP1-201ENST00000265304 SPTBN2O15020 2390 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 EME2A4GXA9 379 aaPredicted RBP13.94□□□□□ -0.18
SSBP1-201ENST00000265304 POC1B-GALNT4F8VUJ3 575 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 NUDT21O43809 227 aaKnown RBP13.94□□□□□ -0.18
SSBP1-201ENST00000265304 STMN1P16949 149 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 CSRP1P21291 193 aaKnown RBP13.94□□□□□ -0.18
SSBP1-201ENST00000265304 NDUFS1P28331 727 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 RAB10P61026 200 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 IL9RQ01113 521 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 HSPA14Q0VDF9 509 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 SQSTM1Q13501 440 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 BOP1Q14137 746 aaKnown RBP13.94□□□□□ -0.18
SSBP1-201ENST00000265304 RPE65Q16518 533 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 PLA2G4EQ3MJ16 856 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 C14orf28Q4W4Y0 310 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 ACSBG2Q5FVE4 666 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 TNFAIP8L3Q5GJ75 292 aa13.94□□□□□ -0.18
SSBP1-201ENST00000265304 LRIG3Q6UXM1 1119 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms