RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 EMX2Q04743 252 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 KCNA10Q16322 511 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 SERINC5Q86VE9 423 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 TBC1D15Q8TC07 691 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 FRS2Q8WU20 508 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 GLMNQ92990 594 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 FAM120BQ96EK7 910 aaKnown RBP12.45□□□□□ -0.42
LIG1-201ENST00000263274 SLC47A1Q96FL8 570 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 COX4I2Q96KJ9 171 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 OR52E6Q96RD3 313 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 RAD21L1Q9H4I0 556 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 RIBC2Q9H4K1 309 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 HPS4Q9NQG7 708 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 PCDHGA8Q9Y5G5 932 aa12.45□□□□□ -0.42
LIG1-201ENST00000263274 PLXNB2O15031 1838 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 WASH4PA8MWX3 477 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 UPK3BL1B0FP48 263 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 UPK3BL2E5RIL1 263 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 GJB5O95377 273 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 RAP2AP10114 183 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 TYMPP19971 482 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 EFNA1P20827 205 aaPredicted RBP12.44□□□□□ -0.42
LIG1-201ENST00000263274 SLC6A4P31645 630 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 HLCSP50747 726 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 CRY1Q16526 586 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ZNF829Q3KNS6 432 aaPredicted RBP12.44□□□□□ -0.42
LIG1-201ENST00000263274 SETMARQ53H47 684 aaPredicted RBP12.44□□□□□ -0.42
LIG1-201ENST00000263274 TXNDC11Q6PKC3 985 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 MBOAT1Q6ZNC8 495 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 DET1Q7L5Y6 550 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 GOLGA7Q7Z5G4 137 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 CENPSQ8N2Z9 138 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 UGT2B28Q9BY64 529 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 DAPK2Q9UIK4 370 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 MED16Q9Y2X0 877 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 TCRBV5S2A0A599 114 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ANKRD66B4E2M5 251 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 M0R3G1 203 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ZNF623O75123 536 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 GSTT2P0CG29 244 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 GSTT2BP0CG30 244 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ALDH3A2P51648 485 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 FOXM1Q08050 763 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 KCNAB2Q13303 367 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ANKRD26P1Q6NSI1 321 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 BEND5Q7L4P6 421 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 MRPL10Q7Z7H8 261 aaKnown RBP12.44□□□□□ -0.42
LIG1-201ENST00000263274 GALNT10Q86SR1 603 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ZFAND4Q86XD8 727 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 LIX1Q8N485 282 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 TEX26Q8N6G2 289 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ADGRE3Q9BY15 652 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 GPR62Q9BZJ7 368 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 CRISPLD1Q9H336 500 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ASB8Q9H765 288 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 VPS4AQ9UN37 437 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 FCF1Q9Y324 198 aaKnown RBP12.44□□□□□ -0.42
LIG1-201ENST00000263274 PCDHB3Q9Y5E6 796 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ST14Q9Y5Y6 855 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 A0A1W2PQ67 120 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 HTR1EP28566 365 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 GKP32189 559 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 RHOAP61586 193 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 TAF1AQ15573 450 aaPredicted RBP12.44□□□□□ -0.42
LIG1-201ENST00000263274 TTC23Q5W5X9 447 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 PRSS55Q6UWB4 352 aaPredicted RBP12.44□□□□□ -0.42
LIG1-201ENST00000263274 SLC22A15Q8IZD6 547 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 TRPV1Q8NER1 839 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 CD200R1Q8TD46 325 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 ACDQ96AP0 544 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 NSMCE3Q96MG7 304 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 BOCQ9BWV1 1114 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 PDE10AQ9Y233 779 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 CORINQ9Y5Q5 1042 aa12.44□□□□□ -0.42
LIG1-201ENST00000263274 E2F3O00716 465 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 ACSL4O60488 711 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 NBNO60934 754 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 ULK1O75385 1050 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 SLC25A14O95258 325 aaPredicted RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 FKBP9O95302 570 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 MYCP01106 439 aaPredicted RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 PSMB9P28065 219 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 FMO3P31513 532 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 ATP5C1P36542 298 aaKnown RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 RELAQ04206 551 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 DDX39BQ13838 428 aaKnown RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 ZNF773Q6PK81 442 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 RNF19BQ6ZMZ0 732 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 FKBP9P1Q75LS8 142 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 RASAL3Q86YV0 1011 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 CNIH3Q8TBE1 160 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 SLC13A3Q8WWT9 602 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 NUSAP1Q9BXS6 441 aaKnown RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 ZIM2Q9NZV7 527 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 OPTCQ9UBM4 332 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 ZNF490Q9ULM2 529 aaPredicted RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 PNMA8BQ9ULN7 279 aaPredicted RBP12.43□□□□□ -0.42
LIG1-201ENST00000263274 LOC285556D6RIA3 1793 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 RAD51BO15315 384 aa12.43□□□□□ -0.42
LIG1-201ENST00000263274 FFAR2O15552 330 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms