RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 OPN1SWP03999 348 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 SMPD1P17405 629 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 IVDP26440 423 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 TAS2R41P59536 307 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 RAB6CQ53S08 254 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 C1orf220Q5T0J3 134 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 CXorf57Q6NSI4 855 aaKnown RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 RAVER1Q8IY67 606 aaKnown RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 TRPV3Q8NET8 790 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 FAM110BQ8TC76 370 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 RAB6CQ9H0N0 254 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 C1orf109Q9NX04 203 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 NUDT4Q9NZJ9 180 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 DNAJB9Q9UBS3 223 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 MANSC4A6NHS7 340 aaPredicted RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 ZNF99A8MXY4 864 aaPredicted RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 H3BM21 787 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 PIGRP01833 764 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 IFNW1P05000 195 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 ENO2P09104 434 aaPredicted RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 CXCR2P25025 360 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 GTF2E2P29084 291 aaKnown RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 UFM1P61960 85 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 ERVK-8P63133 956 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 USP41Q3LFD5 358 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 ZNF544Q6NX49 715 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 CLDN19Q8N6F1 224 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 ZFP28Q8NHY6 868 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 SLC35F5Q8WV83 523 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 AP3S1Q92572 193 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 TEFMQ96QE5 360 aaKnown RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 ACBD6Q9BR61 282 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 SP140LQ9H930 580 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 SNTG1Q9NSN8 517 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 IMP3Q9NV31 184 aaKnown RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 BAZ2AQ9UIF9 1905 aaKnown RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 TRAV19A0A0A6YYK7 116 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 TCAF2A6NFQ2 919 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 IRAK2O43187 625 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 RPL3P39023 403 aaKnown RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 GDF5P43026 501 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 C6orf183Q5T699 404 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 KRT77Q7Z794 578 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 ZC3H3Q8IXZ2 948 aaKnown RBP13.37□□□□□ -0.27
TCF3-201ENST00000262965 GPR22Q99680 433 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 TTPALQ9BTX7 342 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 SPATA5L1Q9BVQ7 753 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 TMEM39AQ9NV64 488 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 ING4Q9UNL4 249 aa13.37□□□□□ -0.27
TCF3-201ENST00000262965 MYH11P35749 1972 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 ACSL4O60488 711 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 SEMA3DO95025 777 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 MYL9P24844 172 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 AKR1D1P51857 326 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 CACNG1Q06432 222 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 IKBKEQ14164 716 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 NPTX1Q15818 432 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 FBXO27Q8NI29 283 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 EEF1AKMT1Q8WVE0 214 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■■□ 26.7
TCF3-201ENST00000262965 KLHL31Q9H511 634 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 CFAP97Q9P2B7 532 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 FADS2P1A8MWK0 482 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 MAGEB17A8MXT2 336 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 NOS1APO75052 506 aaPredicted RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 ECI2O75521 394 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 USP2O75604 605 aaPredicted RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 BCAS2O75934 225 aaPredicted RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 S100A1P23297 94 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 RAB25P57735 213 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 SIX1Q15475 284 aaPredicted RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 CAPN13Q6MZZ7 669 aaPredicted RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 ERICH5Q6P6B1 374 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 PARGQ86W56 976 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 ZNF433Q8N7K0 673 aaPredicted RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 MTMR14Q8NCE2 650 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 CDKN2AIPNLQ96HQ2 116 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 IL4I1Q96RQ9 567 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 CGREF1Q99674 301 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 PTPN18Q99952 460 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 HMX1Q9NP08 348 aaPredicted RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 CD320Q9NPF0 282 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 GTF2IRD1Q9UHL9 959 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 NEDD8-MDP1E9PL57 170 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 BMP10O95393 424 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 ASLP04424 464 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 SPAM1P38567 509 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 DIO3P55073 304 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 HID1Q8IV36 788 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 SMG8Q8ND04 991 aaKnown RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 CXorf40AQ8TE69 158 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 DENND1AQ8TEH3 1009 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 ZNF558Q96NG5 402 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 KIFC1Q9BW19 673 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
TCF3-201ENST00000262965 POLR3BQ9NW08 1133 aaPredicted RBP13.36□□□□□ -0.27
TCF3-201ENST00000262965 OR6C75A6NL08 312 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms