RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 SNX32Q86XE0 403 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 TMIEQ8NEW7 156 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 NXNL1Q96CM4 212 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 MTFMTQ96DP5 389 aaKnown RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 DTNBP1Q96EV8 351 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 GPR21Q99679 349 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 CYP4F12Q9HCS2 524 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ELOVL2Q9NXB9 296 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 SUCOQ9UBS9 1254 aaKnown RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 PSAT1Q9Y617 370 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 PIPSLA2A3N6 862 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 PI15O43692 258 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 NRP2O60462 931 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 GPIP06744 558 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 PSMA4P25789 261 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 TARSP26639 723 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 HOXC12P31275 282 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ATP12AP54707 1039 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 SEC13P55735 322 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 CRADDP78560 199 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ENDOVQ8N8Q3 282 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 HGH1Q9BTY7 390 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 PDFQ9HBH1 243 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 TMEM30AQ9NV96 361 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 SCAMP3O14828 347 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 FZD6O60353 706 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 RPL17P18621 184 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 GLRBP48167 497 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 PSME3P61289 254 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 TEAD4Q15561 434 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 RFTN2Q52LD8 501 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ASRGL1Q7L266 308 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ZNF683Q8IZ20 524 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 PPP1R13LQ8WUF5 828 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 RMI1Q9H9A7 625 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ARL15Q9NXU5 204 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 MRPS17Q9Y2R5 130 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 C15orf41Q9Y2V0 281 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ZNF451Q9Y4E5 1061 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 VEGFDO43915 354 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 SH3BGRLO75368 114 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ZMPSTE24O75844 475 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 SOX30O94993 753 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 PSMG1O95456 288 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 INTS11Q5TA45 600 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 FAM20CQ8IXL6 584 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 POF1BQ8WVV4 589 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ROGDIQ9GZN7 287 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 EVLQ9UI08 416 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 K7EPI3 171 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 DCXO43602 365 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 CCNDBP1O95273 360 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 RPS17P08708 135 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ELFN1P0C7U0 828 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 FMO4P31512 558 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 ABL2P42684 1182 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 NR6A1Q15406 480 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 CAPN13Q6MZZ7 669 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 C16orf46Q6P387 395 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 SERPINA9Q86WD7 417 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 EID3Q8N140 333 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 FAM174AQ8TBP5 190 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 JSRP1Q96MG2 331 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 DPY30Q9C005 99 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 NOL6Q9H6R4 1146 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 GKN1Q9NS71 199 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 PCDHGC4Q9Y5F7 938 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 CHRNA4P43681 627 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 Q6ZNB5 142 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 EPHX4Q8IUS5 362 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 SLC41A1Q8IVJ1 513 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 LINGO1Q96FE5 620 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 POLR1BQ9H9Y6 1135 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 DNMT3BQ9UBC3 853 aaKnown RBP8.1□□□□□ -1.11
PTPN3-201ENST00000262539 PPIL1Q9Y3C6 166 aa8.1□□□□□ -1.11
PTPN3-201ENST00000262539 WNT9AO14904 365 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 UGT2B4P06133 528 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 SPATA31D3P0C874 917 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 MRPL19P49406 292 aaKnown RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 NFATC2Q13469 925 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 PPP2R2DQ66LE6 453 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 SPATA31D4Q6ZUB0 917 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 GALNT4Q8N4A0 578 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 AP2M1Q96CW1 435 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 MTERF3Q96E29 417 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TMPRSS4Q9NRS4 437 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 THUMPD1Q9NXG2 353 aaKnown RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 LRRC37A2A6NM11 1700 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TGM5O43548 720 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 IL6P05231 212 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 ACPPP15309 386 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 CD1DP15813 335 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 CLK1P49759 484 aaKnown RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TRAF2Q12933 501 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 GK3PQ14409 553 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 RCN1Q15293 331 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 WLSQ5T9L3 541 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 CDHR3Q6ZTQ4 885 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 OTOP2Q7RTS6 562 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 KIAA2013Q8IYS2 634 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms