RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 GGT7Q9UJ14 662 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 TP53TG5Q9Y2B4 290 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 PSAT1Q9Y617 370 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 ITPR3Q14573 2671 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 DUX1O43812 170 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 LEFTY1O75610 366 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 RFPL1O75677 317 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 ZWINTO95229 277 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 ASMTLO95671 621 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 ALPIP09923 528 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 CTSEP14091 401 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 UGT1A3P35503 534 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 ARCN1P48444 511 aaKnown RBP13.11□□□□□ -0.31
SGCA-201ENST00000262018 SCNN1BP51168 640 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 CCNHP51946 323 aaPredicted RBP13.11□□□□□ -0.31
SGCA-201ENST00000262018 CSE1LP55060 971 aaKnown RBP13.11□□□□□ -0.31
SGCA-201ENST00000262018 LAMB3Q13751 1172 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 ELOCQ15369 112 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 DEFB109BQ30KR1 87 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 TSTD2Q5T7W7 516 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 NLRP9Q7RTR0 991 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 TMPRSS9Q7Z410 1059 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 SLITRK4Q8IW52 837 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 CNTN4Q8IWV2 1026 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 EFCAB3Q8N7B9 438 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 APOBEC4Q8WW27 367 aaKnown RBP13.11□□□□□ -0.31
SGCA-201ENST00000262018 APOPT1Q96IL0 206 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 MCMBPQ9BTE3 642 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 CDH19Q9H159 772 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 SEMA6CQ9H3T2 930 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 IL1RAPL1Q9NZN1 696 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 SLC17A6Q9P2U8 582 aa13.11□□□□□ -0.31
SGCA-201ENST00000262018 MED13Q9UHV7 2174 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 CELSR2Q9HCU4 2923 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 GMNCA6NCL1 334 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 MROH6A6NGR9 719 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 EBAG9O00559 213 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 TM9SF1O15321 606 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 POP4O95707 220 aaKnown RBP13.1□□□□□ -0.31
SGCA-201ENST00000262018 FAM107AO95990 144 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 PRKCGP05129 697 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 PYGBP11216 843 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 PAMP19021 973 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 CA4P22748 312 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 ITGB7P26010 798 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 RPA3P35244 121 aaPredicted RBP13.1□□□□□ -0.31
SGCA-201ENST00000262018 CSNK1DP48730 415 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 ARSDP51689 593 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 WDR4P57081 412 aaKnown RBP13.1□□□□□ -0.31
SGCA-201ENST00000262018 RAD51Q06609 339 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 BMPR2Q13873 1038 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 SEPT6Q14141 434 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 GRM3Q14832 879 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 ATXN7L2Q5T6C5 722 aaPredicted RBP13.1□□□□□ -0.31
SGCA-201ENST00000262018 MAMDC2Q7Z304 686 aaPredicted RBP13.1□□□□□ -0.31
SGCA-201ENST00000262018 HID1Q8IV36 788 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 RYBPQ8N488 228 aaPredicted RBP13.1□□□□□ -0.31
SGCA-201ENST00000262018 GALNT11Q8NCW6 608 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 DENND6BQ8NEG7 585 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 MGARPQ8TDB4 240 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 BCAS4Q8TDM0 211 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 CKAP2Q8WWK9 683 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 PEX13Q92968 403 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 PMEPA1Q969W9 287 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 EXOC2Q96KP1 924 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 RBBP8Q99708 897 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 HEPHQ9BQS7 1158 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 TDRD1Q9BXT4 1180 aaKnown RBP13.1□□□□□ -0.31
SGCA-201ENST00000262018 IARS2Q9NSE4 1012 aaKnown RBP13.1□□□□□ -0.31
SGCA-201ENST00000262018 CUEDC1Q9NWM3 386 aaPredicted RBP13.1□□□□□ -0.31
SGCA-201ENST00000262018 SLC2A6Q9UGQ3 507 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 RIMKLBQ9ULI2 386 aa13.1□□□□□ -0.31
SGCA-201ENST00000262018 EFCAB7A8K855 629 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 GOLGA8RI6L899 631 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 NEMP1O14524 444 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 AP1G1O43747 822 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 PRLP01236 227 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 ARNTP27540 789 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 SPRP35270 261 aaPredicted RBP13.09□□□□□ -0.31
SGCA-201ENST00000262018 IGFALSP35858 605 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 BLKP51451 505 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 LIMK2P53671 638 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 SEC24CP53992 1094 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 ACVR1Q04771 509 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 CDC20Q12834 499 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 LRRC14Q15048 493 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 CNGA3Q16281 694 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 MYLK3Q32MK0 819 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 MROH9Q5TGP6 573 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 MACC1Q6ZN28 852 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 SPRED1Q7Z699 444 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 STRA8Q7Z7C7 330 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 SRLQ86TD4 932 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 GKN2Q86XP6 184 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 OR6K2Q8NGY2 324 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 BRSK1Q8TDC3 778 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms