RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 SCN1BQ07699 218 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 SMARCB1Q12824 385 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 EEF1DP3Q658K8 133 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 ADNP2Q6IQ32 1131 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 TMEM192Q8IY95 271 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 TESCQ96BS2 214 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 LGR4Q9BXB1 951 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 PNO1Q9NRX1 252 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 MAN2B2Q9Y2E5 1009 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 SETD1AO15047 1707 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 SLC15A5A6NIM6 579 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 AKAP8O43823 692 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 NOBOXO60393 691 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 WFS1O76024 890 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 PRKCHP24723 683 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 QPCTQ16769 361 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 LRRC73Q5JTD7 316 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 CAND1Q86VP6 1230 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 SRFBP1Q8NEF9 429 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 TMEM165Q9HC07 324 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 BRD7Q9NPI1 651 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 TVP23BQ9NYZ1 205 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 GRXCR2A6NFK2 248 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 SLC31A1O15431 190 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 IL7RP16871 459 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 AVPR1BP47901 424 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 AMZ1Q400G9 498 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 PLPPR4Q7Z2D5 763 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 HID1Q8IV36 788 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 ATAD1Q8NBU5 361 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 C1orf216Q8TAB5 229 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 LRTOMTQ8WZ04 291 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 CCDC120Q96HB5 630 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 NUDT4Q9NZJ9 180 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 SMCO3A2RU48 225 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 RCCD1A6NED2 376 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 OR2AT4A6NND4 320 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 SMAD9O15198 467 aaKnown RBP14.09□□□□□ -0.15
CUX2-201ENST00000261726 ITIH1P19827 911 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 PLA2G16P53816 162 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 CLCQ05315 142 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 C12orf65Q9H3J6 166 aaKnown RBP14.09□□□□□ -0.15
CUX2-201ENST00000261726 SRMSQ9H3Y6 488 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 KCNMB3Q9NPA1 279 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 SNTG1Q9NSN8 517 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 GRHL1Q9NZI5 618 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 PLLPQ9Y342 182 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 EDF1O60869 148 aaKnown RBP14.09□□□□□ -0.15
CUX2-201ENST00000261726 SLC6A9P48067 706 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 CHIT1Q13231 466 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 TEX44Q53QW1 395 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 OGFRL1Q5TC84 451 aaPredicted RBP14.09□□□□□ -0.15
CUX2-201ENST00000261726 PRAMEF17Q5VTA0 474 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 CRELD2Q6UXH1 353 aaPredicted RBP14.09□□□□□ -0.15
CUX2-201ENST00000261726 FAM92BQ6ZTR7 304 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 OR10A6Q8NH74 314 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 UFD1Q92890 307 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 ADAM7Q9H2U9 754 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 SLC28A3Q9HAS3 691 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 LRRC4CQ9HCJ2 640 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 HPF1Q9NWY4 346 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 ZNF180Q9UJW8 692 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 TOPAZ1Q8N9V7 1692 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 TGDSO95455 350 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 NFATC1O95644 943 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 CSTF1Q05048 431 aaKnown RBP14.09□□□□□ -0.15
CUX2-201ENST00000261726 CCDC80Q76M96 950 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 TRABD2AQ86V40 505 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 HCAR2Q8TDS4 363 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 TRMOQ9BU70 441 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 SMPD3Q9NY59 655 aaPredicted RBP14.09□□□□□ -0.15
CUX2-201ENST00000261726 MLXQ9UH92 298 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 ALOX15BO15296 676 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 KDM4BO94953 1096 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 PSKH1P11801 424 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 TACR2P21452 398 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 NRLP54845 237 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 ILF3Q12906 894 aaKnown RBP eCLIP14.09□□□□□ -0.15
CUX2-201ENST00000261726 GANABQ14697 944 aaKnown RBP14.09□□□□□ -0.15
CUX2-201ENST00000261726 DACT2Q5SW24 774 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 P2RY8Q86VZ1 359 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 STYXQ8WUJ0 223 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 CSPG4P5Q96PW8 444 aa14.09□□□□□ -0.15
CUX2-201ENST00000261726 C5orf60A6NFR6 353 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 GSC2O15499 205 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 B3GALT2O43825 422 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 MPP2Q14168 576 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 PAOXQ6QHF9 649 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 MOB2Q70IA6 237 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 FOXRED2Q8IWF2 684 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.08□□□□□ -0.15
CUX2-201ENST00000261726 GPR151Q8TDV0 419 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 OVCA2Q8WZ82 227 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 SLC35G5Q96KT7 338 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 COMMD3Q9UBI1 195 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 ADAMTSL3P82987 1691 aa14.08□□□□□ -0.15
CUX2-201ENST00000261726 RLN2P04090 185 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 SLC5A3P53794 718 aa14.08□□□□□ -0.16
CUX2-201ENST00000261726 RPL19P84098 196 aaKnown RBP14.08□□□□□ -0.16
CUX2-201ENST00000261726 SP2Q02086 613 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms