RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TISP43B9A030 160 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 B9A039 149 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 M0QYV0 167 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 BTN3A3O00478 584 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 TBX18O95935 607 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 CRYABP02511 175 aaKnown RBP7.64□□□□□ -1.19
GPNMB-201ENST00000258733 RNASE9P60153 205 aaKnown RBP7.64□□□□□ -1.19
GPNMB-201ENST00000258733 UBE2SQ16763 222 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 EXOC3L4Q17RC7 722 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 C2CD6Q53TS8 623 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 ZNF385CQ66K41 422 aaPredicted RBP7.64□□□□□ -1.19
GPNMB-201ENST00000258733 C11orf63Q6NUN7 778 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 PTCHD4Q6ZW05 846 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 MICU3Q86XE3 530 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 TMEM126BQ8IUX1 230 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 NSMAFQ92636 917 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 RHBDF1Q96CC6 855 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 FAM84BQ96KN1 310 aaPredicted RBP7.64□□□□□ -1.19
GPNMB-201ENST00000258733 OR52B2Q96RD2 323 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 ADGRE3Q9BY15 652 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 ROPN1BQ9BZX4 212 aaPredicted RBP7.64□□□□□ -1.19
GPNMB-201ENST00000258733 ELOVL6Q9H5J4 265 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 EFCAB1Q9HAE3 211 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 ROPN1Q9HAT0 212 aaPredicted RBP7.64□□□□□ -1.19
GPNMB-201ENST00000258733 KCNK12Q9HB15 430 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 ABCB10Q9NRK6 738 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 SLC22A11Q9NSA0 550 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 SH3BP4Q9P0V3 963 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 HEY2Q9UBP5 337 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 ABCG2Q9UNQ0 655 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 STARD10Q9Y365 291 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 PCDHAC2Q9Y5I4 1007 aa7.64□□□□□ -1.19
GPNMB-201ENST00000258733 ABCC4O15439 1325 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 ABHD14A-ACY1A0A1B0GW23 586 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 C9orf170A2RU37 121 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 SLC15A5A6NIM6 579 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 IQCF5A8MTL0 148 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 DVL2O14641 736 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 DNAJB6O75190 326 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 UPK1BO75841 260 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 CXCL14O95715 111 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 GSRP00390 522 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 SERPINA6P08185 405 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 NUDT7P0C024 238 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 RD3LP0DJH9 198 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 PRPS1L1P21108 318 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 ALDH3A2P51648 485 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 NRG1Q02297 640 aaPredicted RBP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 KRR1Q13601 381 aaKnown RBP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 CCNIQ14094 377 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 NECTIN1Q15223 517 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 KCNMB1Q16558 191 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 MCMDC2Q4G0Z9 681 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 RIPPLY2Q5TAB7 128 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 DDI2Q5TDH0 399 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 VASNQ6EMK4 673 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 USP30Q70CQ3 517 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 LIX1LQ8IVB5 337 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 CELF2-AS1Q8N7Q2 184 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 KYQ8NBH2 561 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 TAS1R2Q8TE23 839 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 MAFIPQ8WZ33 124 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 WNT8BQ93098 351 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 NARS2Q96I59 477 aaKnown RBP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 CCDC74BQ96LY2 380 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 PWWP2AQ96N64 755 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 SH2D3AQ9BRG2 576 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 OSBPL11Q9BXB4 747 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 SEMA6CQ9H3T2 930 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 ANKRD19PQ9H560 264 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 FOLH1BQ9HBA9 442 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 SPASTQ9UBP0 616 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 NXF1Q9UBU9 619 aaKnown RBP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 NDRG3Q9UGV2 375 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 PCDHB8Q9UN66 801 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 MTO1Q9Y2Z2 717 aaKnown RBP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 NUBP2Q9Y5Y2 271 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 TAF1LQ8IZX4 1826 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 FAM234BA2RU67 622 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 XKRY2A2RUG3 117 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 M0QZ92 97 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 ITGB1BP1O14713 200 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 HSPA12AO43301 675 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 HTRA2O43464 458 aaPredicted RBP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 PRKAB2O43741 272 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 FMO6PO60774 539 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 OR2B3O76000 313 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 ACSM4P0C7M7 580 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 TRAPPC2P0DI81 140 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 TRAPPC2BP0DI82 140 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 TMIGD3P0DMS9 266 aaPredicted RBP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 SAGP10523 405 aaPredicted RBP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 PF4V1P10720 104 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 BMP4P12644 408 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 C6P13671 934 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 MUC1P15941 1255 aaPredicted RBP7.63□□□□□ -1.19
GPNMB-201ENST00000258733 ABCB4P21439 1286 aa7.63□□□□□ -1.19
GPNMB-201ENST00000258733 SHMT2P34897 504 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms