RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 PLPPR4Q7Z2D5 763 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 CYP4Z1Q86W10 505 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 C10orf111Q8N326 155 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 CADM2Q8N3J6 435 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 L3HYPDHQ96EM0 354 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 PCED1BQ96HM7 432 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 ZNF583Q96ND8 569 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 SMOQ99835 787 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 RBM4BQ9BQ04 359 aaKnown RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 CHCHD6Q9BRQ6 235 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 RBM4Q9BWF3 364 aaKnown RBP14.15□□□□□ -0.14
SDC1-201ENST00000254351 ZNF451Q9Y4E5 1061 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 GMPPBQ9Y5P6 360 aa14.15□□□□□ -0.14
SDC1-201ENST00000254351 TTC3P53804 2025 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 M0R129 80 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 GPR39O43194 453 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 AIREO43918 545 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 LGALS2P05162 132 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 SLC2A3P11169 496 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 HTR1EP28566 365 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 TAF6P49848 677 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 CDKN1CP49918 316 aaPredicted RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 AFF1P51825 1210 aaKnown RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 DGKEP52429 567 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 CLPPQ16740 277 aaPredicted RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 FAM174BQ3ZCQ3 159 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 RFTN2Q52LD8 501 aaPredicted RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 TPRG1LQ5T0D9 272 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 DCAF15Q66K64 600 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 DCP2Q8IU60 420 aaKnown RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 KRTCAP2Q8N6L1 136 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 PAPD5Q8NDF8 572 aaKnown RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 NEDD4LQ96PU5 975 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 FCRL5Q96RD9 977 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 CLSTN3Q9BQT9 956 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 BTBD2Q9BX70 525 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 SPATC1LQ9H0A9 340 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 CD274Q9NZQ7 290 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 UXTQ9UBK9 157 aaPredicted RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 DNAJB9Q9UBS3 223 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 ZNF221Q9UK13 617 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 DNMT3AQ9Y6K1 912 aaPredicted RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 USP34Q70CQ2 3546 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 MEIS3P2A8K0S8 358 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 MATN4O95460 622 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 GUCA1CO95843 209 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 SLC2A4P14672 509 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 GADD45AP24522 165 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 LILRA4P59901 499 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 E2F2Q14209 437 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 NDUFA5Q16718 116 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 ZNF404Q494X3 552 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 ATAD3CQ5T2N8 411 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 DLEU7Q6UYE1 221 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 ARHGAP12Q8IWW6 846 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 PARP16Q8N5Y8 322 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 METTL6Q8TCB7 284 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 ZNF300Q96RE9 604 aaPredicted RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 CENPOQ9BU64 300 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 CRTAC1Q9NQ79 661 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 THG1LQ9NWX6 298 aaKnown RBP14.14□□□□□ -0.15
SDC1-201ENST00000254351 OPTCQ9UBM4 332 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 ADAMTS5Q9UNA0 930 aa14.14□□□□□ -0.15
SDC1-201ENST00000254351 IQCF5A8MTL0 148 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 PAPSS2O95340 614 aaPredicted RBP14.13□□□□□ -0.15
SDC1-201ENST00000254351 OR2B6P58173 313 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 RPL38P63173 70 aaKnown RBP14.13□□□□□ -0.15
SDC1-201ENST00000254351 FAM189BP81408 668 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 PTPRRQ15256 657 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 ZNF691Q5VV52 312 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 CEP68Q76N32 757 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 NETO1Q8TDF5 533 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 SLC6A13Q9NSD5 602 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 SCN3BQ9NY72 215 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 COQ3Q9NZJ6 369 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 AGO1Q9UL18 857 aaKnown RBP14.13□□□□□ -0.15
SDC1-201ENST00000254351 ACTL7AQ9Y615 435 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 LAMA2P24043 3122 aaKnown RBP14.13□□□□□ -0.15
SDC1-201ENST00000254351 GLP2RO95838 553 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 VIPP01282 170 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 CYP11A1P05108 521 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 TGFB3P10600 412 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 S100A5P33763 92 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 CRISP3P54108 245 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 HMGCS1Q01581 520 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 NEK5Q6P3R8 708 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 USP50Q70EL3 339 aaPredicted RBP14.13□□□□□ -0.15
SDC1-201ENST00000254351 CIR1Q86X95 450 aaPredicted RBP14.13□□□□□ -0.15
SDC1-201ENST00000254351 TCAIMQ8N3R3 496 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 BEND7Q8N7W2 519 aaPredicted RBP14.13□□□□□ -0.15
SDC1-201ENST00000254351 PIK3C3Q8NEB9 887 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 TXNDC15Q96J42 360 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 FCRL2Q96LA5 508 aaPredicted RBP14.13□□□□□ -0.15
SDC1-201ENST00000254351 SLC2A13Q96QE2 648 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 UGT2B28Q9BY64 529 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 IRF2BPLQ9H1B7 796 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 PKP3Q9Y446 797 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 ZSCAN5BA6NJL1 495 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 PAGE1O75459 146 aa14.13□□□□□ -0.15
SDC1-201ENST00000254351 CAPN1P07384 714 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms