RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RASSF9O75901 435 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 TMEM63AO94886 807 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 GSTM1P09488 218 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 SEPHS1P49903 392 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 RAB15P59190 212 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 GSTM4Q03013 218 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 DCAF12Q5T6F0 453 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 ARHGAP40Q5TG30 622 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 CACHD1Q5VU97 1274 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 CES3Q6UWW8 571 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 NAPRTQ6XQN6 538 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 GPR155Q7Z3F1 870 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 PRSS42Q7Z5A4 293 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 CAND1Q86VP6 1230 aaKnown RBP22.38■■□□□ 1.17
LSM4-201ENST00000252816 MFSD3Q96ES6 412 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 ZDHHC12Q96GR4 267 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 CCNL2Q96S94 520 aaPredicted RBP22.38■■□□□ 1.17
LSM4-201ENST00000252816 ASPSCR1Q9BZE9 553 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 ZNF768Q9H5H4 540 aaKnown RBP22.38■■□□□ 1.17
LSM4-201ENST00000252816 FBXO8Q9NRD0 319 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 HEBP2Q9Y5Z4 205 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 COLEC10Q9Y6Z7 277 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 OR5K3A6NET4 321 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 QSOX1O00391 747 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 ARNTP27540 789 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 CD151P48509 253 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 KLHL35Q6PF15 583 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 PHC3Q8NDX5 983 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 ELMO1Q92556 727 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 FERD3LQ96RJ6 166 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 TTC1Q99614 292 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 NRTNQ99748 197 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 MRM3Q9HC36 420 aaKnown RBP22.37■■□□□ 1.17
LSM4-201ENST00000252816 CATSPERZQ9NTU4 200 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 HRASLS2Q9NWW9 162 aa22.37■■□□□ 1.17
LSM4-201ENST00000252816 STMND1H3BQB6 276 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 IFRD1O00458 451 aaPredicted RBP22.36■■□□□ 1.17
LSM4-201ENST00000252816 LIN7AO14910 233 aaPredicted RBP22.36■■□□□ 1.17
LSM4-201ENST00000252816 CD3EAPO15446 510 aaKnown RBP22.36■■□□□ 1.17
LSM4-201ENST00000252816 FTH1P02794 183 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 OR56A5P0C7T3 313 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 NDUFS1P28331 727 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 FNTAP49354 379 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 SH3BP2P78314 561 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 VAC14Q08AM6 782 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 KRT33BQ14525 404 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 BRD3Q15059 726 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 VASH2Q86V25 355 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 MPP5Q8N3R9 675 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 SNRNP27Q8WVK2 155 aaKnown RBP22.36■■□□□ 1.17
LSM4-201ENST00000252816 KLHL6Q8WZ60 621 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 BBC3Q96PG8 261 aaPredicted RBP22.36■■□□□ 1.17
LSM4-201ENST00000252816 SEMA5BQ9P283 1151 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 SOX13Q9UN79 622 aa22.36■■□□□ 1.17
LSM4-201ENST00000252816 IGHV5-51A0A0C4DH38 117 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 GOLGA6L10A0A0M3HER8 536 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 SLC5A10A0PJK1 596 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 OR6C74A6NCV1 312 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 K7ENP7 123 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 TCP1P17987 556 aaKnown RBP22.35■■□□□ 1.17
LSM4-201ENST00000252816 ARCN1P48444 511 aaKnown RBP22.35■■□□□ 1.17
LSM4-201ENST00000252816 GNG11P61952 73 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 SARNPP82979 210 aaKnown RBP22.35■■□□□ 1.17
LSM4-201ENST00000252816 AARS2Q5JTZ9 985 aaKnown RBP22.35■■□□□ 1.17
LSM4-201ENST00000252816 ZNF449Q6P9G9 518 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 INO80CQ6PI98 192 aaPredicted RBP22.35■■□□□ 1.17
LSM4-201ENST00000252816 CEACAM20Q6UY09 585 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 ACVR1CQ8NER5 493 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 OR4E2Q8NGC2 313 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 LKAAEAR1Q8TD35 194 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 TFGQ92734 400 aaPredicted RBP22.35■■□□□ 1.17
LSM4-201ENST00000252816 TEFMQ96QE5 360 aaKnown RBP22.35■■□□□ 1.17
LSM4-201ENST00000252816 MAP3K3Q99759 626 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 TRIM56Q9BRZ2 755 aaKnown RBP22.35■■□□□ 1.17
LSM4-201ENST00000252816 SPRY4Q9C004 299 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 PCDHB11Q9Y5F2 797 aa22.35■■□□□ 1.17
LSM4-201ENST00000252816 BHMG1C9JSJ3 638 aaPredicted RBP22.34■■□□□ 1.17
LSM4-201ENST00000252816 GOLGA8MH3BSY2 632 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 POLR1CO15160 346 aaPredicted RBP22.34■■□□□ 1.17
LSM4-201ENST00000252816 VAPBO95292 243 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 ITGB6P18564 788 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 ACADLP28330 430 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 BOP1Q14137 746 aaKnown RBP22.34■■□□□ 1.17
LSM4-201ENST00000252816 SOWAHCQ53LP3 525 aaPredicted RBP22.34■■□□□ 1.17
LSM4-201ENST00000252816 CCDC81Q6ZN84 652 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 OOSP2Q86WS3 158 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 MCUQ8NE86 351 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 GRK7Q8WTQ7 553 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 NKD1Q969G9 470 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 DDX47Q9H0S4 455 aaKnown RBP22.34■■□□□ 1.17
LSM4-201ENST00000252816 MVB12BQ9H7P6 319 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 ANAPC5Q9UJX4 755 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 ATMQ13315 3056 aa22.34■■□□□ 1.17
LSM4-201ENST00000252816 IQCF5A8MTL0 148 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 GOLGA8KD6RF30 607 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 GOLGA8TH3BQL2 631 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 NELFEP18615 380 aaKnown RBP22.33■■□□□ 1.17
LSM4-201ENST00000252816 POLR2CP19387 275 aaPredicted RBP22.33■■□□□ 1.17
LSM4-201ENST00000252816 WT1P19544 449 aaPredicted RBP22.33■■□□□ 1.17
LSM4-201ENST00000252816 CCR7P32248 378 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms