RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 ST3GAL5Q9UNP4 418 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 MITFO75030 526 aaPredicted RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 CNMDO75829 334 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 F9P00740 461 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 MLNP12872 115 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 RFC2P35250 354 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 APLP1P51693 650 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 POLR2JP52435 117 aaKnown RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 UFM1P61960 85 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 SLC36A3Q495N2 470 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 OVOS1Q6IE37 1185 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 UXS1Q8NBZ7 420 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 LEMD2Q8NC56 503 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 CGREF1Q99674 301 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 CATSPERBQ9H7T0 1116 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 ZBTB20Q9HC78 741 aaPredicted RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 INTS7Q9NVH2 962 aaKnown RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 NME7Q9Y5B8 376 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 A8MT66 165 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 A8MUA0 341 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 ALDH3A2P51648 485 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 GEMP55040 296 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 CTBSQ01459 385 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 AP5B1Q2VPB7 878 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 C10orf120Q5SQS8 335 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 AGAP7PQ5VUJ5 663 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 ARNTL2Q8WYA1 636 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 CDK15Q96Q40 435 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 RBM4BQ9BQ04 359 aaKnown RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 RBM4Q9BWF3 364 aaKnown RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 MRPS7Q9Y2R9 242 aaKnown RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 PKP3Q9Y446 797 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 CLCA3PQ9Y6N3 262 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 TRIP11Q15643 1979 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 SEC22BO75396 215 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 PRKCGP05129 697 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 OR4D2P58180 307 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 DAOAP59103 153 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 RPL38P63173 70 aaKnown RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 TIGD6Q17RP2 521 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 TMPRSS11AQ6ZMR5 421 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 DPY19L3Q6ZPD9 716 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 CIR1Q86X95 450 aaPredicted RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 KDM1BQ8NB78 822 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 TESMINQ9Y4I5 508 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 NRCAMQ92823 1304 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 CCDC162PA2VCL2 907 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 PAGE1O75459 146 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 CELF2O95319 508 aaKnown RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 SNAI1O95863 264 aaPredicted RBP13.11□□□□□ -0.31
CCDC117-201ENST00000249064 CCL14Q16627 93 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 STEAP3Q658P3 488 aa13.11□□□□□ -0.31
CCDC117-201ENST00000249064 COL6A1P12109 1028 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 LHX1P48742 406 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 WNT3AP56704 352 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 TUBA3CQ13748 450 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 PTPRCAPQ14761 206 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 TAZQ16635 292 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 PCID2Q5JVF3 399 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 RBM48Q5RL73 367 aaKnown RBP13.1□□□□□ -0.31
CCDC117-201ENST00000249064 FAM45BPQ6NSW5 357 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 TTC23LQ6PF05 361 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 SH2D5Q6ZV89 423 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 PIM3Q86V86 326 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ZC3HC1Q86WB0 502 aaKnown RBP13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ARRDC4Q8NCT1 418 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ASB12Q8WXK4 309 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 TMEM203Q969S6 136 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ROPN1LQ96C74 230 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ATP6V1HQ9UI12 483 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 TRHDEQ9UKU6 1024 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 VWA7Q9Y334 891 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 A8MX80 341 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ZNF701M0R085 212 aaPredicted RBP13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ARVCFO00192 962 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 PPP6CO00743 305 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 AP2A2O94973 939 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 HNF4AP41235 474 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 CASP3P42574 277 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 SMN1Q16637 294 aaKnown RBP13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ZNF648Q5T619 568 aaPredicted RBP13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ZNF621Q6ZSS3 439 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 CEP97Q8IW35 865 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 SLC43A3Q8NBI5 491 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 OR13F1Q8NGS4 319 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 CYP2S1Q96SQ9 504 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 REEP1Q9H902 201 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ING3Q9NXR8 418 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
CCDC117-201ENST00000249064 POLR3HQ9Y535 204 aaPredicted RBP13.1□□□□□ -0.31
CCDC117-201ENST00000249064 NCAM2O15394 837 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 SLC1A2P43004 574 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 RFX4Q33E94 735 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 SLC39A12Q504Y0 691 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 CYBRD1Q53TN4 286 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms