RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PRAMEF33A0A0G2JMD5 474 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 FAM237BA0A1B0GVD1 139 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 MAGEB16A2A368 324 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 MATN2O00339 956 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 DNALI1O14645 258 aaPredicted RBP12.46□□□□□ -0.41
VPREB3-201ENST00000248948 PRMT5O14744 637 aaPredicted RBP12.46□□□□□ -0.41
VPREB3-201ENST00000248948 PFDN6O15212 129 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 FANCGO15287 622 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 CAPN5O15484 640 aaPredicted RBP12.46□□□□□ -0.41
VPREB3-201ENST00000248948 PRAMEF10O60809 474 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 LIPCP11150 499 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 TYRP1P17643 537 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 RPS3P23396 243 aaKnown RBP eCLIP12.46□□□□□ -0.41
VPREB3-201ENST00000248948 MPSTP25325 297 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 SLC5A2P31639 672 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 PAFAH1B1P43034 410 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 MAPK10P53779 464 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 GFERP55789 205 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 TLE3Q04726 772 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 BROXQ5VW32 411 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 CASC4Q6P4E1 433 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 CYB5D1Q6P9G0 228 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 OOSP2Q86WS3 158 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 SPACA3Q8IXA5 215 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 CARFQ8N187 725 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 ACVR1CQ8NER5 493 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 TEFMQ96QE5 360 aaKnown RBP12.46□□□□□ -0.41
VPREB3-201ENST00000248948 PANX3Q96QZ0 392 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 TAAR9Q96RI9 348 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 MVB12BQ9H7P6 319 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 SIDT1Q9NXL6 827 aaKnown RBP12.46□□□□□ -0.41
VPREB3-201ENST00000248948 MARCH4Q9P2E8 410 aaPredicted RBP12.46□□□□□ -0.41
VPREB3-201ENST00000248948 CFAP20Q9Y6A4 193 aaKnown RBP12.46□□□□□ -0.41
VPREB3-201ENST00000248948 PRSS21Q9Y6M0 314 aa12.46□□□□□ -0.41
VPREB3-201ENST00000248948 SLC5A10A0PJK1 596 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 OR5K3A6NET4 321 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 SDR42E2A6NKP2 422 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 EFCAB7A8K855 629 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 C9orf172C9J069 976 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 SMAPO00193 183 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 OR1I1O60431 355 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 AVILO75366 819 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 USP1O94782 785 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 VAPBO95292 243 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 POLBP06746 335 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 FGF3P11487 239 aaPredicted RBP12.45□□□□□ -0.42
VPREB3-201ENST00000248948 CCL4P13236 92 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 PTGIRP43119 386 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 PREPP48147 710 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 TERF1P54274 439 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 ADARP55265 1226 aaKnown RBP12.45□□□□□ -0.42
VPREB3-201ENST00000248948 TMPRSS3P57727 454 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 DR1Q01658 176 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 CLN3Q13286 438 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 BOP1Q14137 746 aaKnown RBP12.45□□□□□ -0.42
VPREB3-201ENST00000248948 DHX34Q14147 1143 aaKnown RBP12.45□□□□□ -0.42
VPREB3-201ENST00000248948 KRT33BQ14525 404 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 TMED2Q15363 201 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 KCTD19Q17RG1 926 aaPredicted RBP12.45□□□□□ -0.42
VPREB3-201ENST00000248948 TMEM135Q86UB9 458 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 FAM129CQ86XR2 697 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 KMT5CQ86Y97 462 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 LMNTD2Q8IXW0 634 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 UBXN4Q92575 508 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 USP7Q93009 1102 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 ZNF669Q96BR6 464 aaPredicted RBP12.45□□□□□ -0.42
VPREB3-201ENST00000248948 TGM7Q96PF1 710 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 TCF12Q99081 682 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 ZPBPQ9BS86 351 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 CARD6Q9BX69 1037 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 ASPSCR1Q9BZE9 553 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 P2RY12Q9H244 342 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 FOXJ2Q9P0K8 574 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 SEMA5BQ9P283 1151 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 KLHL3Q9UH77 587 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 VPS9D1Q9Y2B5 631 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 SSUH2Q9Y2M2 353 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 NBEAQ8NFP9 2946 aa12.45□□□□□ -0.42
VPREB3-201ENST00000248948 TLCD2A6NGC4 264 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 H3BMM5 538 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 STMND1H3BQB6 276 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 GOLGA8MH3BSY2 632 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 NDUFS3O75489 264 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 KRT37O76014 449 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 APOA4P06727 396 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 PDHA2P29803 388 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 LEPRP48357 1165 aaKnown RBP12.44□□□□□ -0.42
VPREB3-201ENST00000248948 ARCN1P48444 511 aaKnown RBP12.44□□□□□ -0.42
VPREB3-201ENST00000248948 ETF1P62495 437 aaKnown RBP12.44□□□□□ -0.42
VPREB3-201ENST00000248948 MC2RQ01718 297 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 COL28A1Q2UY09 1125 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 SNAP47Q5SQN1 464 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 DCAF12Q5T6F0 453 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 IRGCQ6NXR0 463 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 SDCCAG8Q86SQ7 713 aaPredicted RBP12.44□□□□□ -0.42
VPREB3-201ENST00000248948 SLC22A15Q8IZD6 547 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 OTUD6BQ8N6M0 293 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 ASZ1Q8WWH4 475 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 KLHL6Q8WZ60 621 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 LPGAT1Q92604 370 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms