RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 ALG11Q2TAA5 492 aa18.8■□□□□ 0.6
SBDS-201ENST00000246868 ZYG11AQ6WRX3 759 aa18.8■□□□□ 0.6
SBDS-201ENST00000246868 PARGQ86W56 976 aa18.8■□□□□ 0.6
SBDS-201ENST00000246868 GPSM1Q86YR5 675 aa18.8■□□□□ 0.6
SBDS-201ENST00000246868 HID1Q8IV36 788 aa18.8■□□□□ 0.6
SBDS-201ENST00000246868 VRK3Q8IV63 474 aa18.8■□□□□ 0.6
SBDS-201ENST00000246868 NUDCD3Q8IVD9 361 aa18.8■□□□□ 0.6
SBDS-201ENST00000246868 LILRA3Q8N6C8 439 aaPredicted RBP18.8■□□□□ 0.6
SBDS-201ENST00000246868 OSGEPL1Q9H4B0 414 aa18.8■□□□□ 0.6
SBDS-201ENST00000246868 DGKBQ9Y6T7 804 aa18.8■□□□□ 0.6
SBDS-201ENST00000246868 SDK1Q7Z5N4 2213 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 A0A1W2PR77 199 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 WDR91A4D1P6 747 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 TLR4O00206 839 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 SMIM24O75264 130 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 TPBGLP0DKB5 382 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 GNSP15586 552 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 BLKP51451 505 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 AFF3P51826 1226 aaKnown RBP18.79■□□□□ 0.6
SBDS-201ENST00000246868 SP140Q13342 867 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 FZD2Q14332 565 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 ANGPT1Q15389 498 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 TEAD4Q15561 434 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 OR4D1Q15615 310 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 METRNLQ641Q3 311 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 CYHR1Q6ZMK1 362 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 TRIM42Q8IWZ5 723 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 C1orf216Q8TAB5 229 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 NELL1Q92832 810 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 CCDC126Q96EE4 140 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 CAPS2Q9BXY5 557 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 TRIM54Q9BYV2 358 aa18.79■□□□□ 0.6
SBDS-201ENST00000246868 TRNAU1APQ9NX07 287 aaKnown RBP18.79■□□□□ 0.6
SBDS-201ENST00000246868 PRR5-ARHGAP8B1AHC4 643 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 BPGMP07738 259 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 SP9P0CG40 484 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 PDHA2P29803 388 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 C21orf59P57076 290 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 ASPHQ12797 758 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 PLK5Q496M5 336 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 FAM83HQ6ZRV2 1179 aaPredicted RBP18.78■□□□□ 0.6
SBDS-201ENST00000246868 TMEM151AQ8N4L1 468 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 PPP1R14CQ8TAE6 165 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 EXT2Q93063 718 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 ATOH8Q96SQ7 321 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 ADAM21Q9UKJ8 722 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 TMCO1Q9UM00 188 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 ANKRD12Q6UB98 2062 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 FAM86C2PA6NEL3 165 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 SUPT3HB4E1H0 165 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 TARM1B6A8C7 271 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 G3V2L1 256 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 IFRD1O00458 451 aaPredicted RBP18.78■□□□□ 0.6
SBDS-201ENST00000246868 SLC16A5O15375 505 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 HRO43593 1189 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 GPR37L1O60883 481 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 SUPT3HO75486 399 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 S100BP04271 92 aaPredicted RBP18.78■□□□□ 0.6
SBDS-201ENST00000246868 WNT1P04628 370 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 ENO2P09104 434 aaPredicted RBP18.78■□□□□ 0.6
SBDS-201ENST00000246868 SLC35G4P0C7Q5 338 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 CYP2A7P20853 494 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 IDSP22304 550 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 KCNA4P22459 653 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 ITPKAP23677 461 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 ATP5F1P24539 256 aaPredicted RBP18.78■□□□□ 0.6
SBDS-201ENST00000246868 MAP4P27816 1152 aaKnown RBP18.78■□□□□ 0.6
SBDS-201ENST00000246868 HK3P52790 923 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 ABRQ12979 859 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 PCLAFQ15004 111 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 UBE2R2Q712K3 238 aaPredicted RBP18.78■□□□□ 0.6
SBDS-201ENST00000246868 SLC22A9Q8IVM8 553 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 CFAP61Q8NHU2 1237 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 ASB11Q8WXH4 323 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 SUSD2Q9UGT4 822 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 IKZF3Q9UKT9 509 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 KCNK6Q9Y257 313 aa18.78■□□□□ 0.6
SBDS-201ENST00000246868 KNL1Q8NG31 2342 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 VILLO15195 856 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 SNX2O60749 519 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 MATN4O95460 622 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 CATP04040 527 aaKnown RBP18.77■□□□□ 0.6
SBDS-201ENST00000246868 HIST1H2AGP0C0S8 130 aaPredicted RBP18.77■□□□□ 0.6
SBDS-201ENST00000246868 SBK3P0C264 359 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 GFAPP14136 432 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 HIST1H2ADP20671 130 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 ALDH3A1P30838 453 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 ILF3Q12906 894 aaKnown RBP eCLIP18.77■□□□□ 0.6
SBDS-201ENST00000246868 EIF2B5Q13144 721 aaKnown RBP18.77■□□□□ 0.6
SBDS-201ENST00000246868 PDK4Q16654 411 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 TTC19Q6DKK2 380 aaPredicted RBP18.77■□□□□ 0.6
SBDS-201ENST00000246868 SBSNQ6UWP8 590 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 PDZD3Q86UT5 571 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 C10orf107Q8IVU9 208 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 MCOLN3Q8TDD5 553 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 LRRC8CQ8TDW0 803 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 CKAP2Q8WWK9 683 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 HIST1H2AHQ96KK5 128 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 MAGEB18Q96M61 343 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 HIST1H2AJQ99878 128 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms