RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 PRRT3Q5FWE3 981 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 DPPA4Q7L190 304 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 CRLF3Q8IUI8 442 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 PHACTR4Q8IZ21 702 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 OR13C4Q8NGS5 318 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 PPP1R14CQ8TAE6 165 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 GPR78Q96P69 363 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 LRRC37BQ96QE4 947 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 ZNF395Q9H8N7 513 aaPredicted RBP17.11■□□□□ 0.33
HOXC6-201ENST00000243108 CSNK1G3Q9Y6M4 447 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 FAM208BQ5VWN6 2430 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 OR51F1A6NGY5 319 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 H3BM21 787 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 LZTS3O60299 673 aaPredicted RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 FZD6O60353 706 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 RECQL5O94762 991 aaPredicted RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 GOT2P00505 430 aaKnown RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 PCCBP05166 539 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 RALBP11234 206 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 CDK4P11802 303 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 OGNP20774 298 aaKnown RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 SAT1P21673 171 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 ARFIP2P53365 341 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 PTK2BQ14289 1009 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 RBM20Q5T481 1227 aaKnown RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 GPATCH11Q8N954 259 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 SCG3Q8WXD2 468 aaKnown RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 TSACCQ96A04 125 aaPredicted RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 TSNARE1Q96NA8 513 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 SMIM14Q96QK8 99 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 APOOQ9BUR5 198 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 TMEM120AQ9BXJ8 343 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 MYLK2Q9H1R3 596 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 KCNK4Q9NYG8 393 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 DKK4Q9UBT3 224 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 B4GALT6Q9UBX8 382 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 APOBEC3BQ9UH17 382 aaKnown RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 CORO1CQ9ULV4 474 aaPredicted RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 A0A0G2JND7 137 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 A0A0U1RQS6 177 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 ANKRD66B4E2M5 251 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 TARM1B6A8C7 271 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 SBK3P0C264 359 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 SKIV2L2P42285 1042 aaKnown RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 SLC1A6P48664 564 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 ZNF460Q14592 562 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 PTPRCAPQ14761 206 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 TCEA2Q15560 299 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 ALG11Q2TAA5 492 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 TSNAXIP1Q2TAA8 658 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 MRNIPQ6NTE8 343 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 ZYG11AQ6WRX3 759 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 CCDC91Q7Z6B0 441 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 LPCAT1Q8NF37 534 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 OR4L1Q8NH43 312 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 KCTD4Q8WVF5 259 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 ERP27Q96DN0 273 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 TSPAN17Q96FV3 270 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 CDKN2AIPNLQ96HQ2 116 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 OLFM1Q99784 485 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 DUSP23Q9BVJ7 150 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 SUDS3Q9H7L9 328 aaPredicted RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 RUVBL2Q9Y230 463 aaKnown RBP17.1■□□□□ 0.33
HOXC6-201ENST00000243108 RAXQ9Y2V3 346 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 ADAMTS20P59510 1910 aa17.1■□□□□ 0.33
HOXC6-201ENST00000243108 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-201ENST00000243108 TOR1BO14657 336 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 CD3EAPO15446 510 aaKnown RBP17.09■□□□□ 0.33
HOXC6-201ENST00000243108 BUD23O43709 281 aaKnown RBP17.09■□□□□ 0.33
HOXC6-201ENST00000243108 ITM2AO43736 263 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 H2AFYO75367 372 aaKnown RBP17.09■□□□□ 0.33
HOXC6-201ENST00000243108 KLHL2O95198 593 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 WISP3O95389 354 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-201ENST00000243108 ELFN1P0C7U0 828 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 ALPPL2P10696 532 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 PGGT1BP53609 377 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 SLC12A2P55011 1212 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 NCALDP61601 193 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 POLR2LP62875 67 aaKnown RBP17.09■□□□□ 0.33
HOXC6-201ENST00000243108 DLG1Q12959 904 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 ITGA9Q13797 1035 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 NFATC4Q14934 902 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 CDKN3Q16667 212 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 TYSND1Q2T9J0 566 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 LRRC8EQ6NSJ5 796 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 ZCCHC8Q6NZY4 707 aaKnown RBP17.09■□□□□ 0.33
HOXC6-201ENST00000243108 GLT6D1Q7Z4J2 308 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 C10orf67Q8IYJ2 551 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 CBARPQ8N350 705 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-201ENST00000243108 DCBLD1Q8N8Z6 715 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 PDCD6IPQ8WUM4 868 aaKnown RBP17.09■□□□□ 0.33
HOXC6-201ENST00000243108 BTN2A2Q8WVV5 523 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 SIKE1Q9BRV8 207 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 CATSPERZQ9NTU4 200 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 OXSMQ9NWU1 459 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 HACD3Q9P035 362 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 SPASTQ9UBP0 616 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 CAPN7Q9Y6W3 813 aa17.09■□□□□ 0.33
HOXC6-201ENST00000243108 C2orf81A6NN90 581 aa17.08■□□□□ 0.32
HOXC6-201ENST00000243108 YY2O15391 372 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms