RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ZFPM2Q8WW38 1151 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 ASZ1Q8WWH4 475 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 TMEM159Q96B96 161 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 GFM1Q96RP9 751 aaKnown RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 CARD6Q9BX69 1037 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 PHACTR1Q9C0D0 580 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 ZMYND15Q9H091 742 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 TSPYL1Q9H0U9 437 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 CCDC68Q9H2F9 335 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 DPH5Q9H2P9 285 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 LRRN3Q9H3W5 708 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 SYNDIG1Q9H7V2 258 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 KCNK4Q9NYG8 393 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 ZC3H7BQ9UGR2 993 aaKnown RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 TRBV23OR9-2A0A075B6M9 112 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 ZCWPW2A0A1B0GU75 182 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 UBA6A0AVT1 1052 aaPredicted RBP11.04□□□□□ -0.64
SF3B6-201ENST00000233468 PRR19A6NJB7 356 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 DUX1O43812 170 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 KDM1AO60341 852 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 RPLP0P05388 317 aaKnown RBP11.04□□□□□ -0.64
SF3B6-201ENST00000233468 APOA4P06727 396 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 PRSS56P0CW18 603 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 EIF2S3P41091 472 aaKnown RBP11.04□□□□□ -0.64
SF3B6-201ENST00000233468 PLTPP55058 493 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 PDIA2Q13087 525 aaKnown RBP11.04□□□□□ -0.64
SF3B6-201ENST00000233468 CBLBQ13191 982 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 CRYMQ14894 314 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 TYSND1Q2T9J0 566 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 DNTTIP2Q5QJE6 756 aaKnown RBP11.04□□□□□ -0.64
SF3B6-201ENST00000233468 PERM1Q5SV97 790 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.04□□□□□ -0.64
SF3B6-201ENST00000233468 ZNF470Q6ECI4 717 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 SPRED1Q7Z699 444 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 PIM3Q86V86 326 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 KCNMB4Q86W47 210 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 CILP2Q8IUL8 1156 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 Q8N9G6 341 aaPredicted RBP11.04□□□□□ -0.64
SF3B6-201ENST00000233468 ELMO1Q92556 727 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 TMEM74Q96NL1 305 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 STRADBQ9C0K7 418 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 COG4Q9H9E3 785 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 PPANQ9NQ55 473 aaKnown RBP11.04□□□□□ -0.64
SF3B6-201ENST00000233468 FAM114A2Q9NRY5 505 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 AKAP7Q9P0M2 348 aaPredicted RBP11.04□□□□□ -0.64
SF3B6-201ENST00000233468 COMMD10Q9Y6G5 202 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 TENM4Q6N022 2769 aa11.04□□□□□ -0.64
SF3B6-201ENST00000233468 LILRA5A6NI73 299 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 E7ESA3 106 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 NTN3O00634 580 aaPredicted RBP11.03□□□□□ -0.64
SF3B6-201ENST00000233468 PPM1DO15297 605 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 SGTAO43765 313 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 OR1I1O60431 355 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 CPNE6O95741 557 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 RPN2P04844 631 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 ARNTP27540 789 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 ELK3P41970 407 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 EIF3BP55884 814 aaKnown RBP11.03□□□□□ -0.64
SF3B6-201ENST00000233468 UBE2IP63279 158 aaKnown RBP11.03□□□□□ -0.64
SF3B6-201ENST00000233468 CCL7P80098 99 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 MRPS25P82663 173 aaKnown RBP11.03□□□□□ -0.64
SF3B6-201ENST00000233468 SQSTM1Q13501 440 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 FRG1Q14331 258 aaKnown RBP11.03□□□□□ -0.64
SF3B6-201ENST00000233468 RPE65Q16518 533 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 MAP9Q49MG5 647 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 CDCP2Q5VXM1 449 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 KIAA0408Q6ZU52 694 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 TMEM26Q6ZUK4 368 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 OTOAQ7RTW8 1153 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 PALM2Q8IXS6 379 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 ZBED8Q8IZ13 594 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 DCBLD1Q8N8Z6 715 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 PYROXD1Q8WU10 500 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 PATE1Q8WXA2 126 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 ART4Q93070 314 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 CFAP36Q96G28 342 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 C12orf66Q96MD2 445 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 FCRL3Q96P31 734 aaPredicted RBP11.03□□□□□ -0.64
SF3B6-201ENST00000233468 IMP3Q9NV31 184 aaKnown RBP11.03□□□□□ -0.64
SF3B6-201ENST00000233468 NSMCE4AQ9NXX6 385 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 MARCH4Q9P2E8 410 aaPredicted RBP11.03□□□□□ -0.64
SF3B6-201ENST00000233468 FAM8A1Q9UBU6 413 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 MTRF1LQ9UGC7 380 aaKnown RBP11.03□□□□□ -0.64
SF3B6-201ENST00000233468 CHMP2BQ9UQN3 213 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 TEX264Q9Y6I9 313 aa11.03□□□□□ -0.64
SF3B6-201ENST00000233468 OR52A4PA6NMU1 304 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 D6RAR5 112 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 GOLGA8KD6RF30 607 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 E5RI56 91 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 GOLGA8TH3BQL2 631 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 C1QL1O75973 258 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 EML2O95834 649 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 GSTA2P09210 222 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 MTHFD1P11586 935 aaKnown RBP11.02□□□□□ -0.65
SF3B6-201ENST00000233468 BRAFP15056 766 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 AMD1P17707 334 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 CHRM3P20309 590 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 FMO4P31512 558 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 SLC19A1P41440 591 aa11.02□□□□□ -0.65
SF3B6-201ENST00000233468 ABCG1P45844 678 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms