RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 AREL1O15033 823 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 TBX10O75333 385 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 CCNDBP1O95273 360 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 PAX3P23760 479 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 RTL4Q6ZR62 310 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 SNTG1Q9NSN8 517 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 RBM7Q9Y580 266 aaKnown RBP13.19□□□□□ -0.3
NEK4-201ENST00000233027 PCP4L1A6NKN8 68 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 CDH4P55283 916 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 RGS8P57771 180 aaPredicted RBP13.19□□□□□ -0.3
NEK4-201ENST00000233027 FAAH2Q6GMR7 532 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 PSRC1Q6PGN9 363 aaPredicted RBP13.19□□□□□ -0.3
NEK4-201ENST00000233027 SNX33Q8WV41 574 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 SLC39A3Q9BRY0 314 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 YJEFN3A6XGL0 299 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 OR1F1O43749 312 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 NME6O75414 186 aaPredicted RBP13.19□□□□□ -0.3
NEK4-201ENST00000233027 CD247P20963 164 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 CDH15P55291 814 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 DAOAP59103 153 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 PHYKPLQ8IUZ5 450 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 ATP6V1C2Q8NEY4 427 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 CTPS2Q9NRF8 586 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 TBC1D24Q9ULP9 559 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 PTPRJQ12913 1337 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 PRAMEF10O60809 474 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 GADD45GO95257 159 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 ADH1CP00326 375 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 RPLP0P05388 317 aaKnown RBP13.19□□□□□ -0.3
NEK4-201ENST00000233027 TFPIP10646 304 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 HOXB6P17509 224 aaKnown RBP13.19□□□□□ -0.3
NEK4-201ENST00000233027 GLUD2P49448 558 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 LILRA4P59901 499 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 SULT2A1Q06520 285 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 E2F2Q14209 437 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 LARS2Q15031 903 aaKnown RBP13.19□□□□□ -0.3
NEK4-201ENST00000233027 ZMIZ2Q8NF64 920 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 OR13C4Q8NGS5 318 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 SLC13A3Q8WWT9 602 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 OR52B2Q96RD2 323 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 TMEM27Q9HBJ8 222 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 ADAMDEC1O15204 470 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 TBX1O43435 398 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 RAP2AP10114 183 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 IGFBP4P22692 258 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 GMFBP60983 142 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 MERTKQ12866 999 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 ALKBH2Q6NS38 261 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 RPL10LQ96L21 214 aaKnown RBP13.19□□□□□ -0.3
NEK4-201ENST00000233027 EIF2B3Q9NR50 452 aaKnown RBP13.19□□□□□ -0.3
NEK4-201ENST00000233027 TVP23BQ9NYZ1 205 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 PFDN2Q9UHV9 154 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 TLL2Q9Y6L7 1015 aa13.19□□□□□ -0.3
NEK4-201ENST00000233027 EFCAB9A8MZ26 197 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 CKMT2P17540 419 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 NDST2P52849 883 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 SLC30A6Q6NXT4 461 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 LMLNQ96KR4 655 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 IGSF9Q9P2J2 1179 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 DNTTP04053 509 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 ASGR1P07306 291 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 SCN1BQ07699 218 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 SMCO1Q147U7 214 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 NPY5RQ15761 445 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 SLC10A6Q3KNW5 377 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 NADK2Q4G0N4 442 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 GALNTL5Q7Z4T8 443 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 LAPTM4BQ86VI4 370 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 IQCF2Q8IXL9 164 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 KCNC2Q96PR1 638 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 GPER1Q99527 375 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 AKAP7Q9P0M2 348 aaPredicted RBP13.18□□□□□ -0.3
NEK4-201ENST00000233027 XRCC1P18887 633 aaPredicted RBP13.18□□□□□ -0.3
NEK4-201ENST00000233027 TPTEP56180 551 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 UBAP2Q5T6F2 1119 aaKnown RBP13.18□□□□□ -0.3
NEK4-201ENST00000233027 IDNKQ5T6J7 187 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 STX12Q86Y82 276 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 TMEM199Q8N511 208 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 MATN4O95460 622 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 PRKCGP05129 697 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 RPS14P62263 151 aaKnown RBP13.18□□□□□ -0.3
NEK4-201ENST00000233027 GAD2Q05329 585 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 CES5AQ6NT32 575 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 GALNT15Q8N3T1 639 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 OR5K1Q8NHB7 308 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 SCAMP5Q8TAC9 235 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 ZCCHC10Q8TBK6 192 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 RNF31Q96EP0 1072 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 CCDC177Q9NQR7 707 aaPredicted RBP13.18□□□□□ -0.3
NEK4-201ENST00000233027 TRPS1Q9UHF7 1281 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 STOML2Q9UJZ1 356 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 BCL9LQ86UU0 1499 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 RIIAD1A6NNX1 92 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 PSMD9O00233 223 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 MAGEB3O15480 346 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 HCN1O60741 890 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms