RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CRCPO75575 148 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 ATP4BP51164 291 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
SF1-201ENST00000227503 MICU2Q8IYU8 434 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 LEMD2Q8NC56 503 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 PAAF1Q9BRP4 392 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 SLC39A8Q9C0K1 460 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 TRMT13Q9NUP7 481 aaKnown RBP13.88□□□□□ -0.19
SF1-201ENST00000227503 GIMAP4Q9NUV9 329 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 NDFIP2Q9NV92 336 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 PCDHB14Q9Y5E9 798 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 PDZK1P1A8MUH7 402 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 EPHA2P29317 976 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 HOXC13P31276 330 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 GGT5P36269 586 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 KPNA2P52292 529 aaKnown RBP13.88□□□□□ -0.19
SF1-201ENST00000227503 POU4F1Q01851 419 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 PTPRCAPQ14761 206 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 OR4D1Q15615 310 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 SIGIRRQ6IA17 410 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 NEK5Q6P3R8 708 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 OR6F1Q8NGZ6 308 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 AURKBQ96GD4 344 aaPredicted RBP13.88□□□□□ -0.19
SF1-201ENST00000227503 UBXN10Q96LJ8 280 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 NEDD4LQ96PU5 975 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 DEPDC7Q96QD5 511 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 TNKS2Q9H2K2 1166 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 RIBC2Q9H4K1 309 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 C8orf4Q9NR00 106 aa13.88□□□□□ -0.19
SF1-201ENST00000227503 SLC12A8A0AV02 714 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 C17orf102A2RUQ5 167 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 M0QX08 132 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 BCKDKO14874 412 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 CRYZL1O95825 349 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 HLA-DQB2P05538 268 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 THP07101 528 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 ABCB1P08183 1280 aaPredicted RBP13.87□□□□□ -0.19
SF1-201ENST00000227503 MYL3P08590 195 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 UMPSP11172 480 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 CLK1P49759 484 aaKnown RBP13.87□□□□□ -0.19
SF1-201ENST00000227503 PPP2R2BQ00005 443 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 FSCN1Q16658 493 aaKnown RBP13.87□□□□□ -0.19
SF1-201ENST00000227503 TIGD5Q53EQ6 642 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 Q5BKY6 102 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 PRSS36Q5K4E3 855 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 MANEALQ5VSG8 457 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 KIAA0930Q6ICG6 404 aaPredicted RBP13.87□□□□□ -0.19
SF1-201ENST00000227503 RANBP10Q6VN20 620 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 OR6P1Q8NGX9 317 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 LPPQ93052 612 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 MRGPRX2Q96LB1 330 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 ENTPD7Q9NQZ7 604 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 MARCH4Q9P2E8 410 aaPredicted RBP13.87□□□□□ -0.19
SF1-201ENST00000227503 LOC100506127A0A0U1RQW1 187 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 ERVH48-1M5A8F1 160 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 SCO2O43819 266 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 CYBBP04839 570 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 ZNF865P0CJ78 1059 aaPredicted RBP13.87□□□□□ -0.19
SF1-201ENST00000227503 RAP2AP10114 183 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 HOXC8P31273 242 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 GEMP55040 296 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 HERVK_113P63132 956 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 BEX3Q00994 111 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 RCAN2Q14206 197 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 SMU1Q2TAY7 513 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 FAM98BQ52LJ0 330 aaKnown RBP13.87□□□□□ -0.19
SF1-201ENST00000227503 FAM171BQ6P995 826 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 GALNT12Q8IXK2 581 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 PARP16Q8N5Y8 322 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 IL17RDQ8NFM7 739 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 OR2T11Q8NH01 316 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 ERVK-6Q9BXR3 956 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 RUBCNLQ9H714 662 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 NECTIN3Q9NQS3 549 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 TMLHEQ9NVH6 421 aa13.87□□□□□ -0.19
SF1-201ENST00000227503 POLR3BQ9NW08 1133 aaPredicted RBP13.87□□□□□ -0.19
SF1-201ENST00000227503 A0A0U1RQS6 177 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 LOC105371267A0A1B0GV96 52 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 ENPP3O14638 875 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 PAGE1O75459 146 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 CYP7B1O75881 506 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 RBP1P09455 135 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 PCSK1P29120 753 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 POLR2JP52435 117 aaKnown RBP13.86□□□□□ -0.19
SF1-201ENST00000227503 GABARAPL2P60520 117 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 YWHAHQ04917 246 aaPredicted RBP13.86□□□□□ -0.19
SF1-201ENST00000227503 CRY1Q16526 586 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 ZNF691Q5VV52 312 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 TTC23LQ6PF05 361 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.86□□□□□ -0.19
SF1-201ENST00000227503 SVOPQ8N4V2 548 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 GOLM1Q8NBJ4 401 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 ZNF540Q8NDQ6 660 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 CCDC126Q96EE4 140 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 EGLN2Q96KS0 407 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 AMBNQ9NP70 447 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 FAM105AQ9NUU6 356 aa13.86□□□□□ -0.19
SF1-201ENST00000227503 RBM22Q9NW64 420 aaKnown RBP eCLIP13.86□□□□□ -0.191e-7■■■■■ 53.2
SF1-201ENST00000227503 FBXL12Q9NXK8 326 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms