RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 SMC6Q96SB8 1091 aa9.79□□□□□ -0.84
RTCB-201ENST00000216038 VPS11Q9H270 941 aa9.79□□□□□ -0.84
RTCB-201ENST00000216038 C12orf65Q9H3J6 166 aaKnown RBP9.79□□□□□ -0.84
RTCB-201ENST00000216038 TM7SF3Q9NS93 570 aa9.79□□□□□ -0.84
RTCB-201ENST00000216038 ZNHIT2Q9UHR6 403 aa9.79□□□□□ -0.84
RTCB-201ENST00000216038 GNPTGQ9UJJ9 305 aa9.79□□□□□ -0.84
RTCB-201ENST00000216038 ZFC3H1O60293 1989 aaKnown RBP9.79□□□□□ -0.84
RTCB-201ENST00000216038 CACNB4O00305 520 aaPredicted RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 SP9P0CG40 484 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 STMN1P16949 149 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 CNTFP26441 200 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 CD27P26842 260 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 SERPINB4P48594 390 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 DHPSP49366 369 aaPredicted RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 THOP1P52888 689 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 ADARP55265 1226 aaKnown RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 RAB10P61026 200 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 POU4F1Q01851 419 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 LPAL2Q16609 132 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 CNPY1Q3B7I2 92 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 ZNF542PQ5EBM4 170 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 FAM45BPQ6NSW5 357 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 ENPP7Q6UWV6 458 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 TMEM207Q6UWW9 146 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 LPCAT2Q7L5N7 544 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 ZNF547Q8IVP9 402 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 SLC22A18ASQ8N1D0 253 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 LILRA3Q8N6C8 439 aaPredicted RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 SMYD1Q8NB12 490 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 FAM45AQ8TCE6 357 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 GAB3Q8WWW8 586 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 TSACCQ96A04 125 aaPredicted RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 MTBPQ96DY7 904 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 MAGEB18Q96M61 343 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 TUBB6Q9BUF5 446 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 GPAMQ9HCL2 828 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 FGF22Q9HCT0 170 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 ZNF358Q9NW07 568 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 TAS2R13Q9NYV9 303 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 LNPEPQ9UIQ6 1025 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 FBXO4Q9UKT5 387 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 PNMA8BQ9ULN7 279 aaPredicted RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 DMTF1Q9Y222 760 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 PCDHB1Q9Y5F3 818 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 USH1CQ9Y6N9 552 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 ARHGEF17Q96PE2 2063 aaPredicted RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 MUC6Q6W4X9 2439 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 A0A096LPK6 155 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 PFDN1O60925 122 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 E2F6O75461 281 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 WNT1P04628 370 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 C2P06681 752 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 CEACAM5P06731 702 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 OR56A5P0C7T3 313 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 SLC35E2BP0CK96 405 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 THEGLP0DJG4 465 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 FDXRP22570 491 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 RPS3P23396 243 aaKnown RBP eCLIP9.78□□□□□ -0.841e-7■■■■■ 43.8
RTCB-201ENST00000216038 CCR7P32248 378 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 SERPINB8P50452 374 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 PFN3P60673 137 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 PDAP1Q13442 181 aaKnown RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 BOP1Q14137 746 aaKnown RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 CCDC6Q16204 474 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 KLC3Q6P597 504 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 PAQR3Q6TCH7 311 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 MACC1Q6ZN28 852 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 OTOAQ7RTW8 1153 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 ABI3BPQ7Z7G0 1075 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 ANKRD49Q8WVL7 239 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 SCG3Q8WXD2 468 aaKnown RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 GFM2Q969S9 779 aaKnown RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 PDXPQ96GD0 296 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 LRRC37BQ96QE4 947 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 TBC1D10AQ9BXI6 508 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 ZCCHC2Q9C0B9 1178 aaKnown RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 DUSP15Q9H1R2 295 aaPredicted RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 CYP4F12Q9HCS2 524 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 PAIP2BQ9ULR5 123 aaKnown RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 DNAJC16Q9Y2G8 782 aa9.78□□□□□ -0.84
RTCB-201ENST00000216038 GOLGA4Q13439 2230 aaKnown RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 TP53BP1Q12888 1972 aaPredicted RBP9.78□□□□□ -0.84
RTCB-201ENST00000216038 VPS26AO75436 327 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 PTPN4P29074 926 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 CSNK1EP49674 416 aaKnown RBP9.77□□□□□ -0.85
RTCB-201ENST00000216038 CLCN7P51798 805 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 INHBCP55103 352 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 SLC34A1Q06495 639 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 HSPA14Q0VDF9 509 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 GTF2H3Q13889 308 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 NFATC4Q14934 902 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 LIN52Q52LA3 116 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 CEP68Q76N32 757 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 CHST15Q7LFX5 561 aaPredicted RBP9.77□□□□□ -0.85
RTCB-201ENST00000216038 ALDH16A1Q8IZ83 802 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 PLD6Q8N2A8 252 aaKnown RBP9.77□□□□□ -0.85
RTCB-201ENST00000216038 PHC3Q8NDX5 983 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 OR56A4Q8NGH8 313 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 CD200R1Q8TD46 325 aa9.77□□□□□ -0.85
RTCB-201ENST00000216038 KCNJ9Q92806 393 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms