RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 STRA6Q9BX79 667 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 PDZD7Q9H5P4 517 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 RPF2Q9H7B2 306 aaKnown RBP11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 TRIM45Q9H8W5 580 aaPredicted RBP11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 ENOPH1Q9UHY7 261 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 GSTK1Q9Y2Q3 226 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 A0A1B0GW55 424 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 A0A1W2PQ72 361 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 CXCR6O00574 342 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 PIGRP01833 764 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 ADH1AP07327 375 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 DUX4L2P0CJ85 424 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 DUX4L3P0CJ86 424 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 DUX4L4P0CJ87 422 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 DUX4L5P0CJ88 424 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 DUX4L6P0CJ89 424 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 DUX4L7P0CJ90 424 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 LAG3P18627 525 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 CLCNKBP51801 687 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 C15orf39Q6ZRI6 1047 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 UXS1Q8NBZ7 420 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 WDR36Q8NI36 951 aaKnown RBP11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 SLC45A3Q96JT2 553 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 GFM1Q96RP9 751 aaKnown RBP11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 IRF2BPLQ9H1B7 796 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 DUX4Q9UBX2 424 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 EIF2B4Q9UI10 523 aaKnown RBP11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 RIMS3Q9UJD0 308 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 ZNF222Q9UK12 451 aa11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 SAMD4AQ9UPU9 718 aaKnown RBP11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 MRPS23Q9Y3D9 190 aaKnown RBP11.38□□□□□ -0.59
DNMT3B-201ENST00000201963 BHMG1C9JSJ3 638 aaPredicted RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 PAGE1O75459 146 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 C8BP07358 591 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 MBL2P11226 248 aaPredicted RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 CDH1P12830 882 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 HLCSP50747 726 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 ALDH3A2P51648 485 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 EEFSECP57772 596 aaKnown RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 SPIBQ01892 262 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 MBTD1Q05BQ5 628 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 SLC10A2Q12908 348 aaPredicted RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 TUBA3CQ13748 450 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 C16orf62Q7Z3J2 963 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 OR8H1Q8NGG4 311 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 OR52J3Q8NH60 311 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 SHKBP1Q8TBC3 707 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 SPPL2BQ8TCT7 592 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 PHF10Q8WUB8 498 aaKnown RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 DIRAS2Q96HU8 199 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 NKX2-4Q9H2Z4 354 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 LAMB2P55268 1798 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 ATE1O95260 518 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 IL6P05231 212 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 CDH5P33151 784 aaPredicted RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 GPC1P35052 558 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 DSC2Q02487 901 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 KCNAB2Q13303 367 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 LAPTM4AQ15012 233 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 NFE2Q16621 373 aaPredicted RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 ARHGAP15Q53QZ3 475 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 TSTD2Q5T7W7 516 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 C9orf57Q5W0N0 161 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 DCLRE1AQ6PJP8 1040 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 SLC2A7Q6PXP3 512 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 ADAMTSL2Q86TH1 951 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 HID1Q8IV36 788 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 SLC15A3Q8IY34 581 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 SVOPLQ8N434 492 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 KCNA7Q96RP8 456 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 VPS28Q9UK41 221 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 SSR3Q9UNL2 185 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 SPTBN2O15020 2390 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 DOCK3Q8IZD9 2030 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 GRM5P41594 1212 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 GNPDA1P46926 289 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 DIO3P55073 304 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 RPS7P62081 194 aaKnown RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 CYP4F8P98187 520 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 BNC1Q01954 994 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 IRF8Q02556 426 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 HSPA14Q0VDF9 509 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 TPRG1LQ5T0D9 272 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 KIAA0930Q6ICG6 404 aaPredicted RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 BORAQ6PGQ7 559 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 PIWIL3Q7Z3Z3 882 aaKnown RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 CYP4Z1Q86W10 505 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 CLIP4Q8N3C7 705 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 ABHD11Q8NFV4 315 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 MYLPFQ96A32 169 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 ITPKCQ96DU7 683 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 ANKRD60Q9BZ19 345 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 MFSD1Q9H3U5 465 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 IL23AQ9NPF7 189 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 KLHL1Q9NR64 748 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 TLR8Q9NR97 1041 aaKnown RBP11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 ABCC13Q9NSE7 274 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 GMIPQ9P107 970 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 GIT1Q9Y2X7 761 aa11.37□□□□□ -0.59
DNMT3B-201ENST00000201963 KRBA1A5PL33 1030 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms