RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 OR7A17O14581 309 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 STX16O14662 325 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 ANKRD28O15084 1053 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 VPS26AO75436 327 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 C1QCP02747 245 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 FMO3P31513 532 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 TGFBR1P36897 503 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 RBM48Q5RL73 367 aaKnown RBP13.81□□□□□ -0.2
USH1C-201ENST00000005226 TMEM236Q5W0B7 351 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 GCNT7Q6ZNI0 430 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 GOLGA7Q7Z5G4 137 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 NECAB2Q7Z6G3 386 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 SLCO6A1Q86UG4 719 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 NKAPQ8N5F7 415 aaKnown RBP13.81□□□□□ -0.2
USH1C-201ENST00000005226 DPP10Q8N608 796 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 NDNFQ8TB73 568 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 NCLNQ969V3 563 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 CNDP2Q96KP4 475 aaKnown RBP13.81□□□□□ -0.2
USH1C-201ENST00000005226 BTN2A3PQ96KV6 586 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 SGIP1Q9BQI5 828 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 CCSER2Q9H7U1 834 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 POLE4Q9NR33 117 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 SLC25A37Q9NYZ2 338 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 ERVK-18Q9QC07 812 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 CPQQ9Y646 472 aa13.81□□□□□ -0.2
USH1C-201ENST00000005226 DICER1Q9UPY3 1922 aaKnown RBP13.8□□□□□ -0.2
USH1C-201ENST00000005226 IGLV3-10A0A075B6K4 115 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 FAM92AA1XBS5 289 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 E5RI56 91 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 KLK8O60259 260 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 COQ9O75208 318 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 TULP3O75386 442 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 E2F6O75461 281 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 PRLP01236 227 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 FTH1P02794 183 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 HSPA7P48741 367 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 TAF10Q12962 218 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 SIM2Q14190 667 aaPredicted RBP13.8□□□□□ -0.2
USH1C-201ENST00000005226 CTF1Q16619 201 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 PGS1Q32NB8 556 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 SPANXN4Q5MJ08 99 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 TTC23Q5W5X9 447 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 MSRB3Q8IXL7 192 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 SUSD3Q96L08 255 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 MYOCQ99972 504 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 MYO16Q9Y6X6 1858 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 LOC100130705A0A1B0GUX0 176 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 ZBBXA8MT70 800 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 SLC1A7O00341 560 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 HOXB8P17481 243 aaPredicted RBP13.8□□□□□ -0.2
USH1C-201ENST00000005226 HPCAL1P37235 193 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 ISL1P61371 349 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 PPP2R2BQ00005 443 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 TUBA3CQ13748 450 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 DGCR6Q14129 220 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 PAGE2BQ5JRK9 111 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 TXNDC11Q6PKC3 985 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 MRPL10Q7Z7H8 261 aaKnown RBP13.8□□□□□ -0.2
USH1C-201ENST00000005226 FBXO32Q969P5 355 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 NODALQ96S42 347 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 HERC2P3Q9BVR0 1158 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 NSUN3Q9H649 340 aaKnown RBP13.8□□□□□ -0.2
USH1C-201ENST00000005226 PRDM8Q9NQV8 689 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 DNAJB9Q9UBS3 223 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 SNX5Q9Y5X3 404 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 NLRC5Q86WI3 1866 aa13.8□□□□□ -0.2
USH1C-201ENST00000005226 C16orf96A6NNT2 1141 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 JAK1P23458 1154 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 VBP1P61758 197 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 IL5RAQ01344 420 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 EMX1Q04741 257 aaPredicted RBP13.79□□□□□ -0.2
USH1C-201ENST00000005226 CYP4F3Q08477 520 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 LAIR1Q6GTX8 287 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 AFTPHQ6ULP2 937 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 CCDC81Q6ZN84 652 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 ZNF548Q8NEK5 533 aaPredicted RBP13.79□□□□□ -0.2
USH1C-201ENST00000005226 GTF2H4Q92759 462 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 MUL1Q969V5 352 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 ZNF382Q96SR6 550 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 IPPKQ9H8X2 491 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 PDFQ9HBH1 243 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 HEBP1Q9NRV9 189 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 VNN3Q9NY84 501 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 MTRRQ9UBK8 725 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 NUP214P35658 2090 aaPredicted RBP13.79□□□□□ -0.2
USH1C-201ENST00000005226 DRGXA6NNA5 263 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 CLDN25C9JDP6 229 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 CXCR6O00574 342 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
USH1C-201ENST00000005226 NDUFS2O75306 463 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 PRAMEF12O95522 483 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 HOXD9P28356 352 aaPredicted RBP13.79□□□□□ -0.2
USH1C-201ENST00000005226 CA5AP35218 305 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 DCTP40126 519 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 RPS24P62847 133 aaKnown RBP13.79□□□□□ -0.2
USH1C-201ENST00000005226 KCNC4Q03721 635 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 RAPSNQ13702 412 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 KIAA0040Q15053 153 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 MAPK11Q15759 364 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms