RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Akap12Q9WTQ5 1684 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Mcpt4P21812 246 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Nr5a2P45448 560 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 GlrbP48168 496 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 4933415F23RikQ14BX6 153 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 1700057G04RikQ3V0U0 232 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Trp53i11Q4QQM4 189 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Spock1Q62288 442 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Ift52Q62559 426 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Lpcat4Q6NVG1 524 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Pcyt1bQ811Q9 369 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Kctd3Q8BFX3 815 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Ptrh1Q8BW00 204 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Tmem161bQ8C2L6 487 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Clec4a3Q8JZX6 237 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 GmdsQ8K0C9 372 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Etfrf1Q91V16 86 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Slc44a3Q921V7 656 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Cnot11Q9CWN7 505 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Fam83dQ9D7I8 585 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Tlr4Q9QUK6 835 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 VapbQ9QY76 243 aaKnown RBP9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 HephQ9Z0Z4 1157 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Ssxb6A2BI74 170 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 MbP04247 154 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 PlatP11214 559 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Phf12Q5SPL2 1003 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Clns1aQ61189 236 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Slc20a1Q61609 681 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Gga2Q6P5E6 603 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Tmed3Q78IS1 221 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Q810N5 247 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Zbtb26Q8C8S0 451 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Scamp1Q8K021 338 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Slc25a3Q8VEM8 357 aaKnown RBP9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Olfr818Q8VG46 318 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 CtsmQ9JL96 333 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 PfasQ5SUR0 1337 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Scgb2b19J3QM75 112 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Arl6O88848 186 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 CcnkO88874 554 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Gna12P27600 379 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Grid2Q61625 1007 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 IppkQ6P1C1 489 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Usp49Q6P9L4 685 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Trappc6aQ78XR0 159 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Slc34a3Q80SU6 601 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Ptk7Q8BKG3 1062 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Upf1Q9EPU0 1124 aaKnown RBP9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Ngly1Q9JI78 651 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 DgkeQ9R1C6 564 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Scgb2b12S4R2L0 112 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Znf143O70230 638 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Cfl1P18760 166 aaKnown RBP9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Ctps1P70698 591 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 RptnP97347 1118 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 D630036H23RikQ3UQD6 204 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Vamp1Q62442 118 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Stk17bQ8BG48 372 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Mab21l2Q8BPP1 359 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Slc39a13Q8BZH0 361 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Atat1Q8K341 421 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Zfp65Q91W94 390 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Vta1Q9CR26 309 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 PrccQ9EQC8 491 aaKnown RBP9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Psma6Q9QUM9 246 aa9.23□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Cd163l1A0A1B0GSB0 991 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 SmoktcrA2KF29 484 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Fam46dB1ATX6 390 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Apold1E9Q0X2 246 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Gm17026K7N6Z0 213 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Mov10P23249 1004 aaKnown RBP9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Marcksl1P28667 200 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Defa11P50709 85 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Gm648Q3UJ22 213 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Il1rapQ61730 570 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 BpiQ67E05 483 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Fam214aQ69ZK7 1075 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Clba1Q8BHN9 321 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Cpsf7Q8BTV2 471 aaKnown RBP9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 FarsaQ8C0C7 508 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Unc5aQ8K1S4 898 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Pdia5Q921X9 517 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 PdgfdQ925I7 370 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Serpinb11Q9CQV3 388 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 AhspQ9CY02 102 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 HnrnpfQ9Z2X1 415 aaKnown RBP9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 CpdO89001 1377 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Znf521Q6KAS7 1311 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Gm6502L7N456 481 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Lta4hP24527 611 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 AmhP27106 555 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 OstnP61364 130 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 ZufspQ3T9Z9 577 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Obox3Q3UT54 335 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Cand1Q6ZQ38 1230 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Pgm2Q7TSV4 620 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Dhx33Q80VY9 698 aaKnown RBP9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 Slc39a9Q8BFU1 308 aa9.22□□□□□ -0.93
Col6a5-201ENSMUST00000165165 4933430I17RikQ8BHW4 495 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms