RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Ttf1Q62187 859 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Actr3bQ641P0 418 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Lrrc75bQ7TPD7 306 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Tmem260Q8BMD6 703 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Gipc3Q8R5M0 297 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 SelenomQ8VHC3 145 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Rnh1Q91VI7 456 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Cryl1Q99KP3 319 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Tdrd1Q99MV1 1172 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Hacd2Q9D3B1 254 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Slc28a3Q9ERH8 703 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Gsk3bQ9WV60 420 aa16.24■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ttc39aA2ACP1 578 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Zfp969A2ART2 485 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ppef1O35655 650 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 PdgfrbP05622 1098 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 FgrP14234 517 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Fam35aQ3UEN2 891 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Zfp560Q3URI6 754 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 PterQ60866 349 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Olfr699Q7TRN3 316 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Kctd7Q8BJK1 289 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 RybpQ8CCI5 228 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Fndc5Q8K4Z2 209 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Sf3b4Q8QZY9 424 aaKnown RBP16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Grk5Q8VEB1 590 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Rassf1Q99MK9 340 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Arv1Q9D0U9 266 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Carm1Q9WVG6 608 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Scgb2b17S4R2V3 82 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Itm2bO89051 266 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 CcnoP0C242 352 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Slc2a7P0C6A1 513 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Pros1Q08761 675 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Rbms2Q8VC70 383 aaKnown RBP16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Efcab7Q8VDY4 628 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Inpp5eQ9JII1 647 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Hacl1Q9QXE0 581 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ndrg3Q9QYF9 375 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Lmtk3Q5XJV6 1424 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Nudt1P53368 156 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Acsm3Q3UNX5 580 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Znrf3Q5SSZ7 913 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Cd53Q61451 219 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Olfr1101Q7TR59 310 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Tfap2dQ91ZK0 452 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Cnot11Q9CWN7 505 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Noxred1Q9D3S5 366 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ccdc86Q9JJ89 426 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Nectin3Q9JLB9 549 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Mta2Q9R190 668 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Umodl1Q5DID3 1319 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Spin2gA0A0N4SW15 236 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Spin2eJ3QNQ0 234 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Itgb3O54890 787 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Tbrg1Q3UB74 406 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 N6amt1Q6SKR2 214 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Pars2Q8CFI5 475 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Olfr1325Q8VF43 315 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 NpntQ91V88 561 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ntn4Q9JI33 628 aa16.23■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Cyp4a12bA2A974 508 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 H2-M11F6U8V3 335 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Npc1O35604 1277 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Adra1dP97714 562 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Pou4f3Q63955 338 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Pramel7Q810Y8 479 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Aoc1Q8JZQ5 751 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 HpgdQ8VCC1 269 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Rhobtb2Q91V93 728 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Tcf7l2Q924A0 459 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ccdc167Q9D162 97 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Pop5Q9DB28 169 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 AurkcO88445 282 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Il3P01586 166 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Il1r1P13504 576 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ptpn1P35821 432 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Tead3P70210 439 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Spire1Q52KF3 598 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Nr2f1Q60632 422 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ncs1Q8BNY6 190 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Vps9d1Q8C190 649 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ftsj1Q8CBC7 324 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Sult1c2Q9D939 296 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Yipf5Q9EQQ2 257 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Ifnar2O35664 513 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Wnt3aP27467 352 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Mib1Q80SY4 1006 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Spata21Q8BHW6 681 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Txnl4bQ8BUH1 149 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Gfm1Q8K0D5 751 aaKnown RBP16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Mlc1Q8VHK5 382 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 CutalQ9D1U5 156 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Q9D4A5 307 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Oxct2aQ9JJN4 520 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Gemin5Q8BX17 1502 aaKnown RBP16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Olfr1305A2AVW3 312 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 PiggD3Z3Y1 983 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Sh3yl1O08641 340 aa16.22■□□□□ 0.19
Col17a1-202ENSMUST00000086923 Gnpda1O88958 289 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms