RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Adam39Q7M762 756 aa17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Hmgxb4Q80Y32 594 aaKnown RBP17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Tmem260Q8BMD6 703 aa17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Stk-ps2Q8C0V7 499 aa17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Nt5dc1Q8C5P5 467 aa17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Sept10Q8C650 452 aa17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Dcaf12l1Q8CBW4 501 aa17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Q8CDN1 933 aa17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Pcdhb11Q91UZ8 797 aa17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Dock1Q8BUR4 1865 aa17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 PhipQ8VDD9 1821 aaKnown RBP17.49■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Kif28pD3YXS5 1028 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Smim18J3QNP2 93 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Slc16a8O35308 492 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Itgb1P09055 798 aaKnown RBP17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Tsta3P23591 321 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Hmgb2P30681 210 aaKnown RBP17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Inpp1P49442 396 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Ppm1hQ3UYC0 513 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 IspdQ5RJG7 447 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Kiaa1841Q68FF0 718 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Bhlhb9Q6PB60 539 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Rad9bQ6WBX7 403 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Lrch3Q8BVU0 778 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Smco1Q8CEZ1 214 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Vopp1Q8R1C3 172 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Clstn3Q99JH7 956 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Mrpl54Q9CPW3 135 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Olfr1215A3KGY3 312 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 RbpjlO08674 515 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 LckP06240 509 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 AprtP08030 180 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 H2-Q8P14430 326 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 DbtP53395 482 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Btbd1P58544 488 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Rps17P63276 135 aaKnown RBP17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 H2-Q6P79568 326 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Zfp868Q3UTQ6 422 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Rbbp7Q60973 425 aaKnown RBP17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Gm7247Q6UY52 187 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 AW551984Q8BGF0 804 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 DhrsxQ8VBZ0 335 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Olfr846Q8VET8 312 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Acsm1Q91VA0 573 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Diras1Q91Z61 198 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Fars2Q99M01 451 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Pfdn1Q9CWM4 122 aa17.48■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Vmn2r53L7N473 806 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Fcgr2P08101 330 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Bmp4P21275 408 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Tm9sf2P58021 662 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Hsd17b3P70385 305 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 ItkQ03526 625 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Pnrc1Q3TWH3 297 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Zfp560Q3URI6 754 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Il1rapQ61730 570 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Creb3Q61817 404 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Dcaf15Q6PFH3 600 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Olfr867Q7TRF3 331 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Map1sQ8C052 973 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 VcpkmtQ8C436 228 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Ca12Q8CI85 354 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Olfr691Q8VGW5 322 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Gbgt1Q8VI38 347 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Oas1dQ8VI95 361 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Cadm3Q99N28 396 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Det1Q9D0A0 550 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Atp5dQ9D3D9 168 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Eif3fQ9DCH4 361 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Orc6Q9WUJ8 262 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Zcchc7B1AX39 541 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Gm8113E0CXS8 587 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Olfr287E9PZS7 322 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 RfngO09009 332 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Lhx8O35652 367 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Dsg3O35902 993 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Rdh7O88451 316 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Hipk1O88904 1210 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Tuba1bP05213 451 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Pxmp2P42925 194 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Ccr5P51682 354 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Apobec1P51908 229 aaKnown RBP17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Tuba1aP68369 451 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 PepdQ11136 493 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Gpr149Q3UVY1 732 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Mpzl3Q3V3F6 237 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Runx1t1Q61909 577 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 TsnQ62348 228 aaKnown RBP17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Rapgefl1Q68EF8 662 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Lingo3Q6GQU6 589 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Znf428Q8C1M2 176 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Zc2hc1cQ8CCG1 527 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 H2-Q4Q8HWB2 354 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Q8K207 121 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Slco6d1Q9D5W6 683 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Mrpl46Q9EQI8 283 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Pkp3Q9QY23 797 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 PnckQ9QYK9 343 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 Cyp2g1Q9WV19 494 aa17.47■□□□□ 0.39
Sqstm1-201ENSMUST00000015981 VapaQ9WV55 249 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms