RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Vmn1r49Q9WUF1 310 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Olfr1040A2ARY1 313 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Surf2P09926 257 aaKnown RBP12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Spp1P10923 294 aaKnown RBP12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 EnpepP16406 945 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 MaxP28574 160 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ndst2P52850 883 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Usp22Q5DU02 525 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Znf280cQ6P3Y5 742 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rasa4Q6PFQ7 802 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Slc39a4Q78IQ7 660 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Aldh3b1Q80VQ0 468 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fem1cQ8CEF1 617 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Nle1Q8VEJ4 485 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Olfr801Q8VEU1 318 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Dhrs7bQ99J47 323 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 CatsperzQ9CQP8 194 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rfc5Q9D0F6 339 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rnf11Q9QYK7 154 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Slc25a14Q9Z2B2 325 aa12.58□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Olfr1153A2AVC0 318 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Krt28A6BLY7 462 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Cyp2b23E9Q593 491 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ncam2O35136 837 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Anxa3O35639 323 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 MaffO54791 156 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Npr1P18293 1057 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Nfatc3P97305 1075 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Dok6Q2MHE5 331 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ago1Q8CJG1 857 aaKnown RBP12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pcdhb8Q91XZ2 779 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ndufb5Q9CQH3 189 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Wdr55Q9CX97 388 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fndc3c1Q6DFV6 1356 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Zfc3h1B2RT41 1992 aaKnown RBP12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Vsig10lD3YZF7 868 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 AldoaP05064 364 aaKnown RBP12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 CidecP56198 239 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 UtyP79457 1212 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Alg6Q3TAE8 507 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Hk3Q3TRM8 922 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pnrc1Q3TWH3 297 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ptpn7Q8BUM3 359 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 CrebzfQ91ZR3 358 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 MpstQ99J99 297 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ndufa5Q9CPP6 116 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Cdkn2aipnlQ9D211 116 aaKnown RBP12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Acsl4Q9QUJ7 711 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Robo3Q9Z2I4 1366 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm20441G3UYJ7 252 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Sema3aO08665 772 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Mthfd2P18155 350 aaKnown RBP12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Mapk1P63085 358 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Brms1lQ3U1T3 323 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Q3U7U4 132 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Trpc5osQ3UHV4 110 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Larp4bQ6A0A2 741 aaKnown RBP12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Sdr16c5Q7TQA3 309 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Znf569Q80W31 679 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm6377Q8BHV4 303 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Nup54Q8BTS4 510 aaKnown RBP12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 PigwQ8C398 503 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Asb14Q8C6Y6 587 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pgm2l1Q8CAA7 621 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 PvrQ8K094 408 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Unc50Q9CQ61 259 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 GrifinQ9D1U0 144 aa12.57□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Trim30bE9PVL6 203 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Il20rbE9Q9A6 308 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm6401L7N2C0 213 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 GzmkO35205 263 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fgf10O35565 209 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pou2f3P31362 431 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Abraxas2Q3TCJ1 415 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Grm5Q3UVX5 1203 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Arhgap1Q5FWK3 439 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 GskipQ8BGR8 139 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 R3hcc1lQ8BJM3 775 aaKnown RBP12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pnpla8Q8K1N1 776 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rab15Q8K386 212 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 AclyQ91V92 1091 aaKnown RBP12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Atp13a2Q9CTG6 1169 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Shmt2Q9CZN7 504 aaKnown RBP12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 CenpkQ9ESN5 271 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 CasrQ9QY96 1079 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Slfn3A0A1L1STQ7 640 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm21885A0A286YDN8 145 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 MntO08789 591 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 JunP05627 334 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Acvr2bP27040 536 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Bpifa6Q0VGU8 367 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Trappc9Q3U0M1 1148 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Cdk15Q3V3A1 433 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Arrdc3Q7TPQ9 414 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Thap1Q8CHW1 210 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Camkk1Q8VBY2 505 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rprd1bQ9CSU0 326 aaKnown RBP12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Clic1Q9Z1Q5 241 aaKnown RBP12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Itgb4A2A863 1818 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fbxo47A2A6H3 451 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms