RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ZFAND4Q86XD8 727 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 FUBP3Q96I24 572 aaKnown RBP eCLIP14.38□□□□□ -0.112e-19■■■■■ 47.5
SCARB2-221ENST00000640341 PSKH2Q96QS6 385 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 TRIB3Q96RU7 358 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 WWOXQ9NZC7 414 aa14.38□□□□□ -0.11
SCARB2-221ENST00000640341 MYCP01106 439 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-221ENST00000640341 EPOP01588 193 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 ENO2P09104 434 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-221ENST00000640341 CCNA2P20248 432 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 MAPKAPK2P49137 400 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 EEFSECP57772 596 aaKnown RBP14.37□□□□□ -0.11
SCARB2-221ENST00000640341 EMX2Q04743 252 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 ITGADQ13349 1161 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 RTP2Q5QGT7 225 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 COLGALT2Q8IYK4 626 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 NTN4Q9HB63 628 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
SCARB2-221ENST00000640341 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 PCDHGA11Q9Y5H2 935 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 UPK3BL1B0FP48 263 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 UPK3BL2E5RIL1 263 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 PRKD3O94806 890 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 CORO1AP31146 461 aaKnown RBP14.37□□□□□ -0.11
SCARB2-221ENST00000640341 VAC14Q08AM6 782 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 CRHR2Q13324 411 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 XKR7Q5GH72 579 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 GLT1D1Q96MS3 346 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 ZBTB18Q99592 522 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 MGME1Q9BQP7 344 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 RRAGCQ9HB90 399 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 CD320Q9NPF0 282 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 FNIP2Q9P278 1114 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 INVSQ9Y283 1065 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 KRT87PA6NCN2 255 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 K7ERQ8 282 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 SH3BGRLO75368 114 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 BCL10O95999 233 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 PIGAP37287 484 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 GSSP48637 474 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 FOXM1Q08050 763 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 DAG1Q14118 895 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 GRAMD4Q6IC98 578 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 CCDC81Q6ZN84 652 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 SLC24A5Q71RS6 500 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 GALNT10Q86SR1 603 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 TMEM173Q86WV6 379 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-221ENST00000640341 C8orf59Q8N0T1 100 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-221ENST00000640341 DDHD1Q8NEL9 900 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 ADGRE3Q9BY15 652 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 DPY30Q9C005 99 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 LHPPQ9H008 270 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 PDFQ9HBH1 243 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 POPDC3Q9HBV1 291 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 PTBP2Q9UKA9 531 aaKnown RBP14.37□□□□□ -0.11
SCARB2-221ENST00000640341 PCDHGA8Q9Y5G5 932 aa14.37□□□□□ -0.11
SCARB2-221ENST00000640341 FFAR2O15552 330 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 RHOAP61586 193 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 GTF2H3Q13889 308 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 DGCR6Q14129 220 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 SPIDRQ14159 915 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 TXNDC11Q6PKC3 985 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 DLEU7Q6UYE1 221 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 TAS1R1Q7RTX1 841 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 EFL1Q7Z2Z2 1120 aaKnown RBP14.36□□□□□ -0.11
SCARB2-221ENST00000640341 PROSER1Q86XN7 944 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 SNX29P2Q8IUI4 249 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 FRS2Q8WU20 508 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 TADA1Q96BN2 335 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 CLPBQ9H078 707 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 ACTL8Q9H568 366 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 CHCHD3Q9NX63 227 aaKnown RBP14.36□□□□□ -0.11
SCARB2-221ENST00000640341 MAGEL2Q9UJ55 1249 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 MYO1GB0I1T2 1018 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 ADAM12O43184 909 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 CDH1P12830 882 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 HTR1EP28566 365 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 SULT1C3Q6IMI6 304 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 LIX1Q8N485 282 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 SOCS4Q8WXH5 440 aa14.36□□□□□ -0.11
SCARB2-221ENST00000640341 NUSAP1Q9BXS6 441 aaKnown RBP14.36□□□□□ -0.11
SCARB2-221ENST00000640341 TUBA8Q9NY65 449 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-221ENST00000640341 SH3PXD2BA1X283 911 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 TYW5A2RUC4 315 aaKnown RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 STX16O14662 325 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 DIRAS1O95057 198 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 SLC25A14O95258 325 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 KLKB1P03952 638 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 RAP2AP10114 183 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 MYCLP1P12525 358 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 EFNA1P20827 205 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 MZF1P28698 734 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 BMXP51813 675 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 NKG7Q16617 165 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PHKG1Q16816 387 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PDCD4Q53EL6 469 aaKnown RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ARMC12Q5T9G4 340 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 CST9Q5W186 159 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 DET1Q7L5Y6 550 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PIWIL3Q7Z3Z3 882 aaKnown RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ZNF554Q86TJ5 538 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms