RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 PAPSS2O95340 614 aaPredicted RBP7.91□□□□□ -1.14
SCARB2-220ENST00000640076 C1QAP02745 245 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 SHBGP04278 402 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 CHRNB1P11230 501 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 HOXB2P14652 356 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 PHBP35232 272 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 HNF1BP35680 557 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 NR1H2P55055 460 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 RNF4P78317 190 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 LAMB3Q13751 1172 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 TAF1AQ15573 450 aaPredicted RBP7.91□□□□□ -1.14
SCARB2-220ENST00000640076 TSTD2Q5T7W7 516 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 ESRP1Q6NXG1 681 aaKnown RBP7.91□□□□□ -1.14
SCARB2-220ENST00000640076 TRMT10BQ6PF06 316 aaKnown RBP7.91□□□□□ -1.14
SCARB2-220ENST00000640076 PARS2Q7L3T8 475 aaKnown RBP7.91□□□□□ -1.14
SCARB2-220ENST00000640076 NLRP9Q7RTR0 991 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 MMAAQ8IVH4 418 aaKnown RBP7.91□□□□□ -1.14
SCARB2-220ENST00000640076 PPM1NQ8N819 430 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 MDGA1Q8NFP4 955 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 OR10H5Q8NGA6 315 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 OR13J1Q8NGT2 312 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 RPLP0P6Q8NHW5 317 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 MOGAT1Q96PD6 335 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 QRSL1Q9H0R6 528 aaKnown RBP7.91□□□□□ -1.14
SCARB2-220ENST00000640076 CCDC68Q9H2F9 335 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 TRABDQ9H4I3 376 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 IPPKQ9H8X2 491 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 VIPAS39Q9H9C1 493 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 FANCFQ9NPI8 374 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 MOCS1Q9NZB8 636 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 LRFN1Q9P244 771 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 SLC2A6Q9UGQ3 507 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 RNF112Q9ULX5 631 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 MRPS17Q9Y2R5 130 aaKnown RBP7.91□□□□□ -1.14
SCARB2-220ENST00000640076 ZNF711Q9Y462 761 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 KCTD3Q9Y597 815 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 N6AMT1Q9Y5N5 214 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 ARL5AQ9Y689 179 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 NFS1Q9Y697 457 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 FAM169AQ9Y6X4 670 aa7.91□□□□□ -1.14
SCARB2-220ENST00000640076 A0A0U1RQS6 177 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 KANSL1LA0AUZ9 987 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 C2orf81A6NN90 581 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 C1QTNF3-AMACRE9PGA6 284 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 BUD23O43709 281 aaKnown RBP7.9□□□□□ -1.14
SCARB2-220ENST00000640076 RNASEH1O60930 286 aaKnown RBP7.9□□□□□ -1.14
SCARB2-220ENST00000640076 ALDH1A2O94788 518 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 STX2P32856 288 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 PSMD8P48556 350 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 ZNF140P52738 457 aaPredicted RBP7.9□□□□□ -1.14
SCARB2-220ENST00000640076 ACVR1Q04771 509 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 FRG1Q14331 258 aaKnown RBP7.9□□□□□ -1.14
SCARB2-220ENST00000640076 CST6Q15828 149 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 CNGA3Q16281 694 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 CDKN3Q16667 212 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 LRRC73Q5JTD7 316 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 EOGTQ5NDL2 527 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 PRAMEF13Q5VWM6 474 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 FAM46CQ5VWP2 391 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 ALS2CLQ60I27 953 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 Q6ZS52 159 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 CYS1Q717R9 158 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 TTC7BQ86TV6 843 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 CCDC103Q8IW40 242 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 UNC5BQ8IZJ1 945 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 OR2T3Q8NH03 318 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 STON2Q8WXE9 905 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 PEX13Q92968 403 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 ARRDC3Q96B67 414 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 PPP1R16AQ96I34 528 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 DNAJC1Q96KC8 554 aaKnown RBP7.9□□□□□ -1.14
SCARB2-220ENST00000640076 ZIM3Q96PE6 472 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 ACSS3Q9H6R3 686 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 LTB4R2Q9NPC1 389 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 MUTYHQ9UIF7 546 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 RIMKLBQ9ULI2 386 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 MMP17Q9ULZ9 603 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 SRPK3Q9UPE1 567 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 SF3B6Q9Y3B4 125 aaKnown RBP7.9□□□□□ -1.14
SCARB2-220ENST00000640076 MTF2Q9Y483 593 aaPredicted RBP7.9□□□□□ -1.14
SCARB2-220ENST00000640076 ST14Q9Y5Y6 855 aa7.9□□□□□ -1.14
SCARB2-220ENST00000640076 NUMA1Q14980 2115 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 SCN8AQ9UQD0 1980 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 A0A0B4J203 849 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 C1orf232A0A0U1RR37 186 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 FAM159BA6NKW6 160 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 TTLL8A6PVC2 850 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 MID1O15344 667 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 ATP8B1O43520 1251 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 B3GALNT1O75752 331 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 PIAS1O75925 651 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 LHCGRP22888 699 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 NFKBIAP25963 317 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 HMGCLP35914 325 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 ARCN1P48444 511 aaKnown RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 EIF3BP55884 814 aaKnown RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 RPS14P62263 151 aaKnown RBP7.9□□□□□ -1.15
SCARB2-220ENST00000640076 PDE1BQ01064 536 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 SEMG2Q02383 582 aa7.9□□□□□ -1.15
SCARB2-220ENST00000640076 ZNF844Q08AG5 666 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms