RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 UGT1A1P22309 533 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 UGT1A4P22310 534 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 UGT1A3P35503 534 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 UGT1A5P35504 534 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 MRPL19P49406 292 aaKnown RBP14.86□□□□□ -0.03
TRIM3-215ENST00000639856 SLC7A2P52569 658 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 GRIK2Q13002 908 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 GAB4Q2WGN9 574 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 VPS26BQ4G0F5 336 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 NAIF1Q69YI7 327 aaPredicted RBP14.86□□□□□ -0.03
TRIM3-215ENST00000639856 SBSNQ6UWP8 590 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 RFLNAQ6ZTI6 216 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 SFTPA1Q8IWL2 248 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 ADCY4Q8NFM4 1077 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 NXPE3Q969Y0 559 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 ATP6V1E2Q96A05 226 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 SCRN2Q96FV2 425 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 LYSMD1Q96S90 227 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 CCT7Q99832 543 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 PKP2Q99959 881 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 HOPXQ9BPY8 73 aaPredicted RBP14.86□□□□□ -0.03
TRIM3-215ENST00000639856 BOCQ9BWV1 1114 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 GNPTGQ9UJJ9 305 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 COL4A3Q01955 1670 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 PIKFYVEQ9Y2I7 2098 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 TRBV5-4A0A0C4DH59 114 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 ANGPT2O15123 496 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 OR4F21O95013 312 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 CTSLP07711 333 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 CHRM1P11229 460 aaPredicted RBP14.85□□□□□ -0.03
TRIM3-215ENST00000639856 ITGALP20701 1170 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 FCARP24071 287 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 DIO3P55073 304 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 BLOC1S3Q6QNY0 202 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 GDPD4Q6W3E5 623 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 USP45Q70EL2 814 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 FRA10AC1Q70Z53 315 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 GPR149Q86SP6 731 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 ETFBKMTQ8IXQ9 262 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 GPR26Q8NDV2 337 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 TSPEARQ8WU66 669 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 PDP2Q9P2J9 529 aa14.85□□□□□ -0.03
TRIM3-215ENST00000639856 WASH3PC4AMC7 463 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 PRRT4C9JH25 899 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 LEFTY1O75610 366 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 RNASEH2AO75792 299 aaKnown RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 ZCCHC18P0CG32 403 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 RECQLP46063 649 aaPredicted RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 PTSQ03393 145 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 HYAL1Q12794 435 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 PCBP2Q15366 365 aaKnown RBP eCLIP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 RAB30Q15771 203 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 CHRNA6Q15825 494 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 MAP7D1Q3KQU3 841 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 POM121L1PQ3SYA9 428 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 COQ5Q5HYK3 327 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 C6orf10Q5SRN2 563 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 IL23RQ5VWK5 629 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 LYPLAL1Q5VWZ2 237 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 TANGO2Q6ICL3 276 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 PRMT9Q6P2P2 845 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 SYCE2Q6PIF2 218 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 TPRG1Q6ZUI0 275 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 MINDY1Q8N5J2 469 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 TMEM102Q8N9M5 508 aaPredicted RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 MRPL38Q96DV4 380 aaKnown RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 ZNF641Q96N77 438 aaPredicted RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 MCCC1Q96RQ3 725 aaPredicted RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 ACOX2Q99424 681 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 BRD9Q9H8M2 597 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 SLC52A3Q9NQ40 469 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 DZANK1Q9NVP4 752 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 AIG1Q9NVV5 245 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 ABCD2Q9UBJ2 740 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 B4GALT6Q9UBX8 382 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 PPIL1Q9Y3C6 166 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 AP4S1Q9Y587 144 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 TNPO3Q9Y5L0 923 aaKnown RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 TCF20Q9UGU0 1960 aaKnown RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 PLXNB3Q9ULL4 1909 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 KIF26AQ9ULI4 1882 aaPredicted RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 GLYATL1P3A0A0U1RQE8 302 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 TCRBV3S1A0A5B6 114 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 ACRV1P26436 265 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 RGS4P49798 205 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 ERVPABLB-1P60509 514 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 FOLH1Q04609 750 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 ARSIQ5FYB1 569 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 OR52B6Q8NGF0 335 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 DUS3LQ96G46 650 aaKnown RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 LRCH3Q96II8 777 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 CDCA3Q99618 268 aaPredicted RBP14.84□□□□□ -0.03
TRIM3-215ENST00000639856 GDF15Q99988 308 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 FAM83CQ9BQN1 747 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 HEPHQ9BQS7 1158 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 HPS4Q9NQG7 708 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 GID8Q9NWU2 228 aa14.84□□□□□ -0.03
TRIM3-215ENST00000639856 C9JVG2 144 aa14.83□□□□□ -0.04
TRIM3-215ENST00000639856 FXYD1O00168 92 aa14.83□□□□□ -0.04
TRIM3-215ENST00000639856 NME4O00746 187 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms