RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 GABREP78334 506 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 SQSTM1Q13501 440 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 HP1BP3Q5SSJ5 553 aaPredicted RBP21.29■■□□□ 1
SCN1B-206ENST00000638536 PCGF5Q86SE9 256 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 KRT222Q8N1A0 295 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 ZCCHC14Q8WYQ9 949 aaKnown RBP21.29■■□□□ 1
SCN1B-206ENST00000638536 SH3KBP1Q96B97 665 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 NRTNQ99748 197 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 WDR83Q9BRX9 315 aaKnown RBP21.29■■□□□ 1
SCN1B-206ENST00000638536 CCDC86Q9H6F5 360 aaKnown RBP21.29■■□□□ 1
SCN1B-206ENST00000638536 PLAC1Q9HBJ0 212 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 MAGEB16A2A368 324 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 LILRA5A6NI73 299 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 EFCAB8A8MWE9 144 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 MTHFD1P11586 935 aaKnown RBP21.29■■□□□ 1
SCN1B-206ENST00000638536 CCKBRP32239 447 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 GPLD1P80108 840 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 C16orf72Q14CZ0 275 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 MORF4L2Q15014 288 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 ZNF789Q5FWF6 425 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 PHF19Q5T6S3 580 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 FOXR1Q6PIV2 292 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 NCSTNQ92542 709 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 ZNF592Q92610 1267 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 AHCYL2Q96HN2 611 aaKnown RBP21.29■■□□□ 1
SCN1B-206ENST00000638536 P2RY12Q9H244 342 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 UCK1Q9HA47 277 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 CDC23Q9UJX2 597 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 PKD1L2Q7Z442 2459 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 KLHL33A6NCF5 533 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 URI1O94763 535 aaPredicted RBP21.28■■□□□ 1
SCN1B-206ENST00000638536 CCR7P32248 378 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 PPM1FP49593 454 aaPredicted RBP21.28■■□□□ 1
SCN1B-206ENST00000638536 TTPAP49638 278 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 EPHA4P54764 986 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 CENPUQ71F23 418 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 SPNS2Q8IVW8 549 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 OTUD6BQ8N6M0 293 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 OR10G6Q8NH81 332 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 ELMO1Q92556 727 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 RSC1A1Q92681 617 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 NXPE2Q96DL1 559 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 STAMBPL1Q96FJ0 436 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 LIN37Q96GY3 246 aaPredicted RBP21.28■■□□□ 1
SCN1B-206ENST00000638536 SNF8Q96H20 258 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 CCDC74BQ96LY2 380 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 TMEM74Q96NL1 305 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 TTC1Q99614 292 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.28■■□□□ 1
SCN1B-206ENST00000638536 POLR1BQ9H9Y6 1135 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 KMT2BQ9UMN6 2715 aaPredicted RBP21.28■■□□□ 1
SCN1B-206ENST00000638536 CACNA1BQ00975 2339 aa21.28■■□□□ 1
SCN1B-206ENST00000638536 PRMT5O14744 637 aaPredicted RBP21.27■■□□□ 1
SCN1B-206ENST00000638536 DUX1O43812 170 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 USP1O94782 785 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 SLC35G4P0C7Q5 338 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 OR56A5P0C7T3 313 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 LSSP48449 732 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 LIMK2P53671 638 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 CSE1LP55060 971 aaKnown RBP21.27■■□□□ 1
SCN1B-206ENST00000638536 TYSND1Q2T9J0 566 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 BBS9Q3SYG4 887 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 AARS2Q5JTZ9 985 aaKnown RBP21.27■■□□□ 1
SCN1B-206ENST00000638536 CTSL3PQ5NE16 218 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 NEPROQ6NW34 567 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 TMEM71Q6P5X7 295 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 ZNF572Q7Z3I7 529 aaPredicted RBP21.27■■□□□ 1
SCN1B-206ENST00000638536 DENND6AQ8IWF6 608 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 PHC3Q8NDX5 983 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 BIRC8Q96P09 236 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 DPH5Q9H2P9 285 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 ZMIZ1Q9ULJ6 1067 aa21.27■■□□□ 1
SCN1B-206ENST00000638536 CCDC187A0A096LP49 1063 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 SLC5A10A0PJK1 596 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 ZW10O43264 779 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 NDUFS3O75489 264 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 UBXN7O94888 489 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 ITIH1P19827 911 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 GFERP55789 205 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 CTBP1Q13363 440 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 BOP1Q14137 746 aaKnown RBP21.26■□□□□ 0.99
SCN1B-206ENST00000638536 SNAP47Q5SQN1 464 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 ARMC3Q5W041 872 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 RAB11FIP2Q7L804 512 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 VRK3Q8IV63 474 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 AVL9Q8NBF6 648 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 OR4D9Q8NGE8 314 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 LPGAT1Q92604 370 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 EBNA1BP2Q99848 306 aaKnown RBP21.26■□□□□ 0.99
SCN1B-206ENST00000638536 VPS37BQ9H9H4 285 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 DKK4Q9UBT3 224 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 CRYL1Q9Y2S2 319 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 FAM169AQ9Y6X4 670 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 UBA6A0AVT1 1052 aaPredicted RBP21.26■□□□□ 0.99
SCN1B-206ENST00000638536 A8MU76 341 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 BHMG1C9JSJ3 638 aaPredicted RBP21.26■□□□□ 0.99
SCN1B-206ENST00000638536 TLX3O43711 291 aaPredicted RBP21.26■□□□□ 0.99
SCN1B-206ENST00000638536 FTH1P02794 183 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 THRAP10827 490 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 EIF3BP55884 814 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms