RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SPA17Q15506 151 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 ANKRD20A2Q5SQ80 823 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 CCDC181Q5TID7 509 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 ANKRD20A1Q5TYW2 823 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 ANKRD20A3Q5VUR7 823 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 TCTN3Q6NUS6 607 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 TMEM135Q86UB9 458 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 SPDYE1Q8NFV5 336 aaPredicted RBP18.02■□□□□ 0.48
CLN6-220ENST00000637450 ACTL9Q8TC94 416 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 NAT14Q8WUY8 206 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 C12orf66Q96MD2 445 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 APOL2Q9BQE5 337 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 FERMT1Q9BQL6 677 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 TWSG1Q9GZX9 223 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 KIR3DX1Q9H7L2 352 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 FGF21Q9NSA1 209 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 SLC24A2Q9UI40 661 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 TP53TG5Q9Y2B4 290 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 PCDHA3Q9Y5H8 950 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 MKRN2OSH3BPM6 223 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 K7EM74 188 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 NTRK1P04629 796 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 PSMB4P28070 264 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 CTNNA1P35221 906 aaKnown RBP18.01■□□□□ 0.47
CLN6-220ENST00000637450 TUBB4BP68371 445 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 KLRB1Q12918 225 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 TUBB2AQ13885 445 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 CAPRIN2Q6IMN6 1127 aaKnown RBP18.01■□□□□ 0.47
CLN6-220ENST00000637450 DUS1LQ6P1R4 473 aaKnown RBP18.01■□□□□ 0.47
CLN6-220ENST00000637450 SARM1Q6SZW1 724 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 OOSP2Q86WS3 158 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 TUBB2BQ9BVA1 445 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 GPR87Q9BY21 358 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 TRIM5Q9C035 493 aa18.01■□□□□ 0.47
CLN6-220ENST00000637450 OR6C74A6NCV1 312 aa18■□□□□ 0.47
CLN6-220ENST00000637450 ZBTB11O95625 1053 aaPredicted RBP18■□□□□ 0.47
CLN6-220ENST00000637450 CRTAMO95727 393 aa18■□□□□ 0.47
CLN6-220ENST00000637450 PTPN7P35236 360 aa18■□□□□ 0.47
CLN6-220ENST00000637450 CYLC1P35663 651 aaPredicted RBP18■□□□□ 0.47
CLN6-220ENST00000637450 PDE1BQ01064 536 aa18■□□□□ 0.47
CLN6-220ENST00000637450 PRPSAP1Q14558 356 aa18■□□□□ 0.47
CLN6-220ENST00000637450 DENND5AQ6IQ26 1287 aa18■□□□□ 0.47
CLN6-220ENST00000637450 FAM199XQ6PEV8 388 aaPredicted RBP18■□□□□ 0.47
CLN6-220ENST00000637450 CDKL3Q8IVW4 592 aaPredicted RBP18■□□□□ 0.47
CLN6-220ENST00000637450 CFAP206Q8IYR0 622 aa18■□□□□ 0.47
CLN6-220ENST00000637450 CARFQ8N187 725 aa18■□□□□ 0.47
CLN6-220ENST00000637450 LILRA3Q8N6C8 439 aaPredicted RBP18■□□□□ 0.47
CLN6-220ENST00000637450 OR13C4Q8NGS5 318 aa18■□□□□ 0.47
CLN6-220ENST00000637450 DCUN1D1Q96GG9 259 aa18■□□□□ 0.47
CLN6-220ENST00000637450 C19orf43Q9BQ61 176 aa18■□□□□ 0.47
CLN6-220ENST00000637450 CCM2Q9BSQ5 444 aa18■□□□□ 0.47
CLN6-220ENST00000637450 OSBPL8Q9BZF1 889 aa18■□□□□ 0.47
CLN6-220ENST00000637450 ACTL8Q9H568 366 aa18■□□□□ 0.47
CLN6-220ENST00000637450 LUC7LQ9NQ29 371 aaKnown RBP18■□□□□ 0.47
CLN6-220ENST00000637450 KCND1Q9NSA2 647 aa18■□□□□ 0.47
CLN6-220ENST00000637450 TLK1Q9UKI8 766 aa18■□□□□ 0.47
CLN6-220ENST00000637450 COLEC10Q9Y6Z7 277 aa18■□□□□ 0.47
CLN6-220ENST00000637450 NAV2Q8IVL1 2488 aa18■□□□□ 0.47
CLN6-220ENST00000637450 RCCD1A6NED2 376 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 PJA2O43164 708 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 RFPL1O75677 317 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 POLBP06746 335 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 SLC35G4P0C7Q5 338 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 RBP3P10745 1247 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 RALBP11234 206 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 NR1D1P20393 614 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 PTPN4P29074 926 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 KPNA2P52292 529 aaKnown RBP17.99■□□□□ 0.47
CLN6-220ENST00000637450 PMS2P54278 862 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 EIF3EP60228 445 aaKnown RBP17.99■□□□□ 0.47
CLN6-220ENST00000637450 GSE1Q14687 1217 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 ARMC6Q6NXE6 501 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 DARS2Q6PI48 645 aaKnown RBP17.99■□□□□ 0.47
CLN6-220ENST00000637450 APLFQ8IW19 511 aaPredicted RBP17.99■□□□□ 0.47
CLN6-220ENST00000637450 OR8K5Q8NH50 307 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 SEC14L1Q92503 715 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 ULK4Q96C45 1275 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 ZNF501Q96CX3 271 aaPredicted RBP17.99■□□□□ 0.47
CLN6-220ENST00000637450 CALR3Q96L12 384 aaKnown RBP17.99■□□□□ 0.47
CLN6-220ENST00000637450 RMDN2Q96LZ7 410 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 RUFY1Q96T51 708 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 ARNT2Q9HBZ2 717 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 FAM8A1Q9UBU6 413 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 CRLS1Q9UJA2 301 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 MAN2B2Q9Y2E5 1009 aa17.99■□□□□ 0.47
CLN6-220ENST00000637450 ZNF106Q9H2Y7 1883 aaKnown RBP17.99■□□□□ 0.47
CLN6-220ENST00000637450 C17orf113A0A1B0GUU1 675 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 KCNN4O15554 427 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 CPNE3O75131 537 aaKnown RBP17.98■□□□□ 0.47
CLN6-220ENST00000637450 STK10O94804 968 aaKnown RBP17.98■□□□□ 0.47
CLN6-220ENST00000637450 ATP1B2P14415 290 aaPredicted RBP17.98■□□□□ 0.47
CLN6-220ENST00000637450 NDUFS1P28331 727 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 PRLHRP49683 370 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 ZNF140P52738 457 aaPredicted RBP17.98■□□□□ 0.47
CLN6-220ENST00000637450 TMPRSS15P98073 1019 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 SEMA5AQ13591 1074 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 LAMB3Q13751 1172 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 UBAP2LQ14157 1087 aaKnown RBP17.98■□□□□ 0.47
CLN6-220ENST00000637450 GPR19Q15760 415 aa17.98■□□□□ 0.47
CLN6-220ENST00000637450 UGT8Q16880 541 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms