RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 FBXO8Q9NRD0 319 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 SMARCAL1Q9NZC9 954 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 HEBP2Q9Y5Z4 205 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 COL6A6A6NMZ7 2263 aa13.5□□□□□ -0.25
PNKP-228ENST00000637325 SEC16AO15027 2179 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 TRBV5-4A0A0C4DH59 114 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 C17orf113A0A1B0GUU1 675 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 GOLGA6L3A6NEY3 463 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.49□□□□□ -0.25
PNKP-228ENST00000637325 ERVH48-1M5A8F1 160 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 IFRD1O00458 451 aaPredicted RBP13.49□□□□□ -0.25
PNKP-228ENST00000637325 POLR1CO15160 346 aaPredicted RBP13.49□□□□□ -0.25
PNKP-228ENST00000637325 ATXN7O15265 892 aaPredicted RBP13.49□□□□□ -0.25
PNKP-228ENST00000637325 TOX3O15405 576 aaPredicted RBP13.49□□□□□ -0.25
PNKP-228ENST00000637325 SGTAO43765 313 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 ANKRD34CP0C6C1 535 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 GRIA1P42261 906 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 BASP1P80723 227 aaKnown RBP13.49□□□□□ -0.25
PNKP-228ENST00000637325 DBN1Q16643 649 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 TSTD2Q5T7W7 516 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 KIAA1614Q5VZ46 1190 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 ARMC6Q6NXE6 501 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 DUS1LQ6P1R4 473 aaKnown RBP13.49□□□□□ -0.25
PNKP-228ENST00000637325 NLRP9Q7RTR0 991 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 GLIS1Q8NBF1 620 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 PPHLN1Q8NEY8 458 aaKnown RBP13.49□□□□□ -0.25
PNKP-228ENST00000637325 ZFPM2Q8WW38 1151 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 SLC39A7Q92504 469 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 RANBP9Q96S59 729 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 CASS4Q9NQ75 786 aa13.49□□□□□ -0.25
PNKP-228ENST00000637325 SNRNP200O75643 2136 aaKnown RBP13.48□□□□□ -0.25
PNKP-228ENST00000637325 IGLV3-16A0A075B6K0 115 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 CCDC162PA2VCL2 907 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 OR51F1A6NGY5 319 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 F8W8V4 182 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 QSOX1O00391 747 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 EFSO43281 561 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 AP2A2O94973 939 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 GSTM1P09488 218 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 NDUFS1P28331 727 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 NSG1P42857 185 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 KCNJ1P48048 391 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 ARSDP51689 593 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 SESN2P58004 480 aaPredicted RBP13.48□□□□□ -0.25
PNKP-228ENST00000637325 PRAMEP78395 509 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 GSTM4Q03013 218 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 SRSF6Q13247 344 aaKnown RBP13.48□□□□□ -0.25
PNKP-228ENST00000637325 ITIH4Q14624 930 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 LYPLAL1Q5VWZ2 237 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 AFTPHQ6ULP2 937 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 MICALCLQ6ZW33 695 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 PRSS42Q7Z5A4 293 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 OOSP2Q86WS3 158 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 PIANPQ8IYJ0 282 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 CACNA2D3Q8IZS8 1091 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 LILRA3Q8N6C8 439 aaPredicted RBP13.48□□□□□ -0.25
PNKP-228ENST00000637325 LSM14AQ8ND56 463 aaKnown RBP13.48□□□□□ -0.25
PNKP-228ENST00000637325 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
PNKP-228ENST00000637325 OR6P1Q8NGX9 317 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 SNRNP27Q8WVK2 155 aaKnown RBP13.48□□□□□ -0.25
PNKP-228ENST00000637325 NKD1Q969G9 470 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 HDAC10Q969S8 669 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 RMDN2Q96LZ7 410 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 FERD3LQ96RJ6 166 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 RAB33BQ9H082 229 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 ZNF768Q9H5H4 540 aaKnown RBP13.48□□□□□ -0.25
PNKP-228ENST00000637325 COG4Q9H9E3 785 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 APMAPQ9HDC9 416 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 HRASLS2Q9NWW9 162 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 EPHA6Q9UF33 1036 aa13.48□□□□□ -0.25
PNKP-228ENST00000637325 PCM1Q15154 2024 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 FASNP49327 2511 aaKnown RBP13.47□□□□□ -0.25
PNKP-228ENST00000637325 TK2O00142 265 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 AP3B1O00203 1094 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 ZSCAN12O43309 604 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 KIF1CO43896 1103 aaKnown RBP13.47□□□□□ -0.25
PNKP-228ENST00000637325 RAD1O60671 282 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 GOT2P00505 430 aaKnown RBP13.47□□□□□ -0.25
PNKP-228ENST00000637325 PSMA3P25788 255 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 FOXN2P32314 431 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 PPARGP37231 505 aaPredicted RBP13.47□□□□□ -0.25
PNKP-228ENST00000637325 ARL4DP49703 201 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 PRKAA1Q13131 559 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 FASTKD1Q53R41 847 aaKnown RBP13.47□□□□□ -0.25
PNKP-228ENST00000637325 DNTTIP2Q5QJE6 756 aaKnown RBP13.47□□□□□ -0.25
PNKP-228ENST00000637325 CAPRIN2Q6IMN6 1127 aaKnown RBP13.47□□□□□ -0.25
PNKP-228ENST00000637325 CYB5D1Q6P9G0 228 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 NLGN4XQ8N0W4 816 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 CLDN19Q8N6F1 224 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 NLGN4YQ8NFZ3 816 aaPredicted RBP13.47□□□□□ -0.25
PNKP-228ENST00000637325 OR13J1Q8NGT2 312 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 OR4L1Q8NH43 312 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 PBKQ96KB5 322 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 OR6C1Q96RD1 312 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 KIR3DX1Q9H7L2 352 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 EIF2B3Q9NR50 452 aaKnown RBP13.47□□□□□ -0.25
PNKP-228ENST00000637325 BFARQ9NZS9 450 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 SLC2A6Q9UGQ3 507 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 SLC24A2Q9UI40 661 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 ANAPC5Q9UJX4 755 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms