RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	FRG1	Q14331	258 aa	Known RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	TPRG1L	Q5T0D9	272 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	WSCD1	Q658N2	575 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ZNF517	Q6ZMY9	492 aa	Predicted RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PQLC3	Q8N755	202 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	KDM1B	Q8NB78	822 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ARRDC4	Q8NCT1	418 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	SLC7A6	Q92536	515 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	WNT8B	Q93098	351 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	NTAN1	Q96AB6	310 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	LGALS12	Q96DT0	336 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ZHX1-C8orf76	Q96EF9	292 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	RPRD1A	Q96P16	312 aa	Predicted RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	CSPG4P5	Q96PW8	444 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	SLC2A13	Q96QE2	648 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	B3GNT5	Q9BYG0	378 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	NUAK2	Q9H093	628 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	SOX17	Q9H6I2	414 aa	Predicted RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PRDM8	Q9NQV8	689 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	GPATCH2L	Q9NWQ4	482 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	USE1	Q9NZ43	259 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	CCDC59	Q9P031	241 aa	Known RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	FZD10	Q9ULW2	581 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ABT1	Q9ULW3	272 aa	Known RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PCDHGB6	Q9Y5F9	930 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PATJ	Q8NI35	1801 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	MYADML2	A6NDP7	307 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	SLC1A7	O00341	560 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	NME4	O00746	187 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	TOR1A	O14656	332 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ARPC2	O15144	300 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	UBD	O15205	165 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ADAMTS4	O75173	837 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ZNF254	O75437	659 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PRSS23	O95084	383 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	CTSH	P09668	335 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PSKH1	P11801	424 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	IL7R	P16871	459 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	CYP2C18	P33260	490 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	CD68	P34810	354 aa	Predicted RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	RYK	P34925	604 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	MAPK12	P53778	367 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	RHAG	Q02094	409 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	EMX1	Q04741	257 aa	Predicted RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	GNA13	Q14344	377 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	GPAT3	Q53EU6	434 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	NPNT	Q6UXI9	565 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	CLEC20A	Q6ZU45	233 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PTRH1	Q86Y79	214 aa	Known RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	LINC00518	Q8N0U6	118 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	DEFB106A	Q8N104	65 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	MPP5	Q8N3R9	675 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PARP16	Q8N5Y8	322 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	HMGCLL1	Q8TB92	370 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	BPIFB1	Q8TDL5	484 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PPP1R13L	Q8WUF5	828 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	HERVK_113	Q902F9	699 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	MFSD3	Q96ES6	412 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ZFP42	Q96MM3	310 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	KCTD15	Q96SI1	283 aa	Predicted RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	GAD1	Q99259	594 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	NPY6R	Q99463	290 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	RBBP8	Q99708	897 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	REXO4	Q9GZR2	422 aa	Known RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	CCSER2	Q9H7U1	834 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	TEKT2	Q9UIF3	430 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	INTS6	Q9UL03	887 aa	Known RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	USP22	Q9UPT9	525 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PCDHB3	Q9Y5E6	796 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	PCDHGA10	Q9Y5H3	936 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	THSD7B	Q9C0I4	1608 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306		A0A096LPK6	155 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	ARL5C	A6NH57	179 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	UBXN8	O00124	270 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	NCAM2	O15394	837 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	STX7	O15400	261 aa	Known RBP	10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	TPST1	O60507	370 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	PGK1	P00558	417 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	ALPL	P05186	524 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	UQCRC1	P31930	480 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	GGT5	P36269	586 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	THPO	P40225	353 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	HNF4A	P41235	474 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	MLLT3	P42568	568 aa	Predicted RBP	10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	POLD2	P49005	469 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	FLT3LG	P49771	235 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	TKTL1	P51854	596 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	LIMK2	P53671	638 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	GBE1	Q04446	702 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	ACAP2	Q15057	778 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	COQ5	Q5HYK3	327 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	SPANXN3	Q5MJ09	141 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	GARNL3	Q5VVW2	1013 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	DENND5A	Q6IQ26	1287 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	MAMSTR	Q6ZN01	415 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	DPY19L3	Q6ZPD9	716 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	RNF180	Q86T96	592 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	HID1	Q8IV36	788 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	TNS4	Q8IZW8	715 aa		10.61	□□□□□ -0.71

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