RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 DNAJC28Q9NX36 388 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 FAM8A1Q9UBU6 413 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 PNMA8BQ9ULN7 279 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 GPR34Q9UPC5 381 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 VWA7Q9Y334 891 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 COMMD10Q9Y6G5 202 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 EP300Q09472 2414 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 CFAP54Q96N23 3096 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 RALGAPA1Q6GYQ0 2036 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 KMOO15229 486 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 VPS26AO75436 327 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 POP7O75817 140 aaKnown RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 KRT37O76014 449 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 RASGRP1O95267 797 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 TNFP01375 233 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 FTH1P02794 183 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 MPLP40238 635 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 PRLHRP49683 370 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 SLC12A2P55011 1212 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 CDKN2DP55273 166 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 SPEM2Q0P670 501 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 ILF2Q12905 390 aaKnown RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 USP10Q14694 798 aaKnown RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 TCEA2Q15560 299 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 KIF19Q2TAC6 998 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 PYCR3Q53H96 274 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 PRAMEF14Q5SWL7 426 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 PEAR1Q5VY43 1037 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 FAM45BPQ6NSW5 357 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 CHST15Q7LFX5 561 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 FAM45AQ8TCE6 357 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 LKAAEAR1Q8TD35 194 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 SCARF2Q96GP6 870 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 PANX3Q96QZ0 392 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 OR2M4Q96R27 311 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 GPR22Q99680 433 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 CCM2Q9BSQ5 444 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 CAB39LQ9H9S4 337 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 PARD6AQ9NPB6 346 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 GMEB2Q9UKD1 530 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 SNX11Q9Y5W9 270 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 RIF1Q5UIP0 2472 aaKnown RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 IQANK1A0A1B0GTG1 560 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 PATE3B3GLJ2 98 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 TCP11X1B4DZS4 312 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 TRIM49D1C9J1S8 452 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 RETP07949 1114 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 SNRPAP09012 282 aaKnown RBP14.19□□□□□ -0.14
LINC00339-208ENST00000634934 ACP5P13686 325 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 CNTFP26441 200 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 HK3P52790 923 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 PGGT1BP53609 377 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 NCALDP61601 193 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 POU4F1Q01851 419 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 INSCQ1MX18 579 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 TRIM61Q5EBN2 209 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 NAPRTQ6XQN6 538 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 ASRGL1Q7L266 308 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 PHACTR4Q8IZ21 702 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 ELMO1Q92556 727 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 KCNJ9Q92806 393 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 ALKBH8Q96BT7 664 aaKnown RBP14.19□□□□□ -0.14
LINC00339-208ENST00000634934 GPR21Q99679 349 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 OLFM1Q99784 485 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 SLC13A1Q9BZW2 595 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 TCEAL2Q9H3H9 227 aaPredicted RBP14.19□□□□□ -0.14
LINC00339-208ENST00000634934 CAAP1Q9H8G2 361 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 FSCN3Q9NQT6 498 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 TAS2R13Q9NYV9 303 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 KLHL14Q9P2G3 628 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 KLF15Q9UIH9 416 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 DNAJC16Q9Y2G8 782 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 PLEKHM1Q9Y4G2 1056 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 PCDHGA5Q9Y5G8 931 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 DGKBQ9Y6T7 804 aa14.19□□□□□ -0.14
LINC00339-208ENST00000634934 KNL1Q8NG31 2342 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 GVINP1Q7Z2Y8 2422 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 DMXL1Q9Y485 3027 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 HMX2A2RU54 273 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 HNRNPCL1O60812 293 aaKnown RBP14.18□□□□□ -0.14
LINC00339-208ENST00000634934 ATP6V1G2O95670 118 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 CTSEP14091 401 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 EZRP15311 586 aaKnown RBP14.18□□□□□ -0.14
LINC00339-208ENST00000634934 NQO1P15559 274 aaKnown RBP14.18□□□□□ -0.14
LINC00339-208ENST00000634934 JUNDP17535 347 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 KRT15P19012 456 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 TAC1P20366 129 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 FDXRP22570 491 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 CTSKP43235 329 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 BLKP51451 505 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 TAS2R39P59534 338 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 BNC1Q01954 994 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 PDAP1Q13442 181 aaKnown RBP14.18□□□□□ -0.14
LINC00339-208ENST00000634934 BOP1Q14137 746 aaKnown RBP14.18□□□□□ -0.14
LINC00339-208ENST00000634934 MPP2Q14168 576 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 SYTL3Q4VX76 610 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 TCEAL6Q6IPX3 200 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 OTOAQ7RTW8 1153 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 C11orf96Q7Z7L8 435 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 PIM3Q86V86 326 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms