RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 S1PR4O95977 384 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 ESR1P03372 595 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 F7P08709 466 aaPredicted RBP14.44□□□□□ -0.1
PNKP-221ENST00000627317 RPS3P23396 243 aaKnown RBP eCLIP14.44□□□□□ -0.1
PNKP-221ENST00000627317 MCM3P25205 808 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 FMO4P31512 558 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 GPX6P59796 221 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 KYNUQ16719 465 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 ERCC6LQ2NKX8 1250 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 SYTL3Q4VX76 610 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 TEDDM1Q5T9Z0 273 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 GUSBP11Q6P575 273 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 ZNF449Q6P9G9 518 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 PROSER1Q86XN7 944 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 OR2L2Q8NH16 312 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 GLMNQ92990 594 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 LINC00615Q96LM1 132 aaPredicted RBP14.44□□□□□ -0.1
PNKP-221ENST00000627317 CCM2Q9BSQ5 444 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 P2RY12Q9H244 342 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 NCKIPSDQ9NZQ3 722 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 SIRPGQ9P1W8 387 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 ST14Q9Y5Y6 855 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 PIKFYVEQ9Y2I7 2098 aa14.44□□□□□ -0.1
PNKP-221ENST00000627317 COL27A1Q8IZC6 1860 aaPredicted RBP14.44□□□□□ -0.1
PNKP-221ENST00000627317 ZFC3H1O60293 1989 aaKnown RBP14.43□□□□□ -0.1
PNKP-221ENST00000627317 GOLGA4Q13439 2230 aaKnown RBP14.43□□□□□ -0.1
PNKP-221ENST00000627317 NBEAQ8NFP9 2946 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 OPA1O60313 960 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 KRT37O76014 449 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 ACSL3O95573 720 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 FAM153BP0C7A2 387 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 MYBL2P10244 700 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 PKMP14618 531 aaKnown RBP14.43□□□□□ -0.1
PNKP-221ENST00000627317 SLC2A4P14672 509 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 ITGB6P18564 788 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 IDSP22304 550 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 CD151P48509 253 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 CLCNKAP51800 687 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 ADARP55265 1226 aaKnown RBP14.43□□□□□ -0.1
PNKP-221ENST00000627317 VSNL1P62760 191 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 DAB2P98082 770 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 DMPKQ09013 629 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 NFE2L1Q14494 772 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 SEPT7Q16181 437 aaKnown RBP14.43□□□□□ -0.1
PNKP-221ENST00000627317 FAM153CQ494X1 144 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 ZNF789Q5FWF6 425 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 GALNT7Q86SF2 657 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 SLC26A11Q86WA9 606 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 CTAGE3PQ8IX95 158 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 FBF1Q8TES7 1133 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 ZDHHC1Q8WTX9 485 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.43□□□□□ -0.1
PNKP-221ENST00000627317 ELMO1Q92556 727 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 PANX3Q96QZ0 392 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 SPATS2LQ9NUQ6 558 aaKnown RBP14.43□□□□□ -0.1
PNKP-221ENST00000627317 EVA1BQ9NVM1 165 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 TXNDC16Q9P2K2 825 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 GULP1Q9UBP9 304 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 TBC1D29Q9UFV1 150 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 ZFYVE26Q68DK2 2539 aa14.43□□□□□ -0.1
PNKP-221ENST00000627317 C17orf113A0A1B0GUU1 675 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 EME2A4GXA9 379 aaPredicted RBP14.42□□□□□ -0.1
PNKP-221ENST00000627317 TRABD2BA6NFA1 517 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 FAM159BA6NKW6 160 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 SRRM3A6NNA2 597 aaPredicted RBP14.42□□□□□ -0.1
PNKP-221ENST00000627317 E5RI56 91 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 HAUS5O94927 633 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 LEPRP48357 1165 aaKnown RBP14.42□□□□□ -0.1
PNKP-221ENST00000627317 RPIAP49247 311 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 E2F1Q01094 437 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 TARDBPQ13148 414 aaKnown RBP eCLIP14.42□□□□□ -0.1
PNKP-221ENST00000627317 BOP1Q14137 746 aaKnown RBP14.42□□□□□ -0.1
PNKP-221ENST00000627317 TMED2Q15363 201 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 CTSL3PQ5NE16 218 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 CNSTQ6PJW8 725 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 FAM83HQ6ZRV2 1179 aaPredicted RBP14.42□□□□□ -0.1
PNKP-221ENST00000627317 CYS1Q717R9 158 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 TRMT10CQ7L0Y3 403 aaKnown RBP14.42□□□□□ -0.1
PNKP-221ENST00000627317 STRA8Q7Z7C7 330 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 CFAP206Q8IYR0 622 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 KRT222Q8N1A0 295 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 ARL10Q8N8L6 244 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 KYQ8NBH2 561 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 MDM1Q8TC05 714 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 IFI44Q8TCB0 444 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 BIRC8Q96P09 236 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 COG4Q9H9E3 785 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 SARS2Q9NP81 518 aaKnown RBP14.42□□□□□ -0.1
PNKP-221ENST00000627317 COMMD10Q9Y6G5 202 aa14.42□□□□□ -0.1
PNKP-221ENST00000627317 ARHGEF17Q96PE2 2063 aaPredicted RBP14.42□□□□□ -0.1
PNKP-221ENST00000627317 PRR19A6NJB7 356 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 IQCF5A8MTL0 148 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 LIN7AO14910 233 aaPredicted RBP14.41□□□□□ -0.1
PNKP-221ENST00000627317 NIPSNAP2O75323 286 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 SLC35G4P0C7Q5 338 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 F3P13726 295 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 JUPP14923 745 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 RPL10P27635 214 aaKnown RBP14.41□□□□□ -0.1
PNKP-221ENST00000627317 HALP42357 657 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 ABCG1P45844 678 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms