RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 RASGRP3Q8IV61 690 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 OR2L2Q8NH16 312 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 CT55Q8WUE5 264 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 ZDHHC12Q96GR4 267 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 LINC00615Q96LM1 132 aaPredicted RBP13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 FSD1LQ9BXM9 530 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 ARNT2Q9HBZ2 717 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 LHX9Q9NQ69 397 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 SLC24A2Q9UI40 661 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 LNPEPQ9UIQ6 1025 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 EFR3BQ9Y2G0 817 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 MAST4O15021 2626 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 NBPF19A0A087WUL8 3843 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 PIKFYVEQ9Y2I7 2098 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 TCRBV7S2A1N4TA0A589 114 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 KCNN4O15554 427 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 ANXA9O76027 345 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 METTL18O95568 372 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 NTRK1P04629 796 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 MSH3P20585 1137 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 HALP42357 657 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 GDF10P55107 478 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 RPS18P62269 152 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 TMPRSS15P98073 1019 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 SRSF1Q07955 248 aaKnown RBP eCLIP13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 TUBB3Q13509 450 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 ZNF517Q6ZMY9 492 aaPredicted RBP13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 PPP1R3BQ86XI6 285 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 D2HGDHQ8N465 521 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 C9orf43Q8TAL5 461 aaPredicted RBP13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 APOBEC4Q8WW27 367 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 ZNF501Q96CX3 271 aaPredicted RBP13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 C12orf66Q96MD2 445 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 SPATA13Q96N96 652 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 ZCCHC2Q9C0B9 1178 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 RBSNQ9H1K0 784 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 KIR3DX1Q9H7L2 352 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 R3HDM2Q9Y2K5 976 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 PCDHGA6Q9Y5G7 932 aa13.19□□□□□ -0.3
SOX2-OT-241ENST00000626948 FER1L5A0AVI2 2057 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 IGLV3-16A0A075B6K0 115 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 TRBV5-4A0A0C4DH59 114 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 OR6C74A6NCV1 312 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 C5orf60A6NFR6 353 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 BTNL10A8MVZ5 291 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 DNAJB5O75953 348 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 POLBP06746 335 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 PDHA2P29803 388 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 AKT1P31749 480 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 PRLHRP49683 370 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 KLF1Q13351 362 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 DNASE1L3Q13609 305 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 GPR19Q15760 415 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 LONRF2Q1L5Z9 754 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 ZNF789Q5FWF6 425 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 FAM69BQ5VUD6 431 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 PIANPQ8IYJ0 282 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 NXPE1Q8N323 547 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 SIDT2Q8NBJ9 832 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 UBXN4Q92575 508 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 STAMBPL1Q96FJ0 436 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 ZNF514Q96K75 400 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 DNAJC1Q96KC8 554 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 PANX2Q96RD6 677 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 EFHD1Q9BUP0 239 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 TRIM55Q9BYV6 548 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 OR52A5Q9H2C5 316 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 FGF21Q9NSA1 209 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 PIH1D1Q9NWS0 290 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 HRASLS2Q9NWW9 162 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 TP53TG5Q9Y2B4 290 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 DOPEY2Q9Y3R5 2298 aa13.18□□□□□ -0.3
SOX2-OT-241ENST00000626948 UTP20O75691 2785 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 MACROD2A1Z1Q3 448 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 TLCD2A6NGC4 264 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 C2orf81A6NN90 581 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 BTN3A3O00478 584 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 ARHGAP6O43182 974 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 KATNA1O75449 491 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 CREG1O75629 220 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 TPBGLP0DKB5 382 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 TPH1P17752 444 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 CYLC1P35663 651 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 CASRP41180 1078 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 RWDD2BP57060 319 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 FOXK1P85037 733 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 ABRQ12979 859 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 GPS2Q13227 327 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 IL10RAQ13651 578 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 PLCL1Q15111 1095 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 SPA17Q15506 151 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 DNTTIP2Q5QJE6 756 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 ITPRIPL1Q6GPH6 555 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 DARS2Q6PI48 645 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 GAS2L3Q86XJ1 694 aa13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 CDKL3Q8IVW4 592 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-241ENST00000626948 CFAP206Q8IYR0 622 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms