RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 CASQ1P31415 396 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 CSTF2P33240 577 aaKnown RBP eCLIP16.37■□□□□ 0.21
UBE3D-208ENST00000626828 EIF2S3P41091 472 aaKnown RBP16.37■□□□□ 0.21
UBE3D-208ENST00000626828 PTGIRP43119 386 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 CD151P48509 253 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 ETF1P62495 437 aaKnown RBP16.37■□□□□ 0.21
UBE3D-208ENST00000626828 PLOD1Q02809 727 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-208ENST00000626828 PTK6Q13882 451 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 GPR18Q14330 331 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 KRT33BQ14525 404 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 C16orf72Q14CZ0 275 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 CASC4Q6P4E1 433 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 KLHL35Q6PF15 583 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 LRRC69Q6ZNQ3 347 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 KLHL7Q8IXQ5 586 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 MPP5Q8N3R9 675 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 AGBL5Q8NDL9 886 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 MFSD3Q96ES6 412 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 CCDC74BQ96LY2 380 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 COG4Q9H9E3 785 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 IMP3Q9NV31 184 aaKnown RBP16.37■□□□□ 0.21
UBE3D-208ENST00000626828 ASIC3Q9UHC3 531 aa16.37■□□□□ 0.21
UBE3D-208ENST00000626828 FAM237BA0A1B0GVD1 139 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 CDRT15L2A8MXV6 281 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 GOLGA8MH3BSY2 632 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 IFRD1O00458 451 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-208ENST00000626828 PFDN6O15212 129 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 OR1I1O60431 355 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 NDUFS3O75489 264 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 TYRP1P17643 537 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 PAMP19021 973 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 CSF2RBP32927 897 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 ZNF658BQ4V348 819 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-208ENST00000626828 RNASEH2BQ5TBB1 312 aaKnown RBP16.36■□□□□ 0.21
UBE3D-208ENST00000626828 MRNIPQ6NTE8 343 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 CES3Q6UWW8 571 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 XKR5Q6UX68 686 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 ARHGAP22Q7Z5H3 698 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 CLEC14AQ86T13 490 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 LILRA3Q8N6C8 439 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-208ENST00000626828 RCBTB1Q8NDN9 531 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 SPDYE1Q8NFV5 336 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-208ENST00000626828 SERPINB12Q96P63 405 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 TCF12Q99081 682 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 CARD6Q9BX69 1037 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 TSSK1BQ9BXA7 367 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 B3GNT4Q9C0J1 378 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 OR52A5Q9H2C5 316 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 TMEM9Q9P0T7 183 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 EPHA6Q9UF33 1036 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 PISDQ9UG56 409 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 PCDHGA7Q9Y5G6 932 aa16.36■□□□□ 0.21
UBE3D-208ENST00000626828 CFAP20Q9Y6A4 193 aaKnown RBP16.36■□□□□ 0.21
UBE3D-208ENST00000626828 PKD1L2Q7Z442 2459 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 A0A087WV48 116 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 A8MU76 341 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 DNALI1O14645 258 aaPredicted RBP16.35■□□□□ 0.21
UBE3D-208ENST00000626828 PRMT5O14744 637 aaPredicted RBP16.35■□□□□ 0.21
UBE3D-208ENST00000626828 NVLO15381 856 aaKnown RBP16.35■□□□□ 0.21
UBE3D-208ENST00000626828 HGFP14210 728 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 PCBP4P57723 403 aaKnown RBP16.35■□□□□ 0.21
UBE3D-208ENST00000626828 DR1Q01658 176 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 SEMA3AQ14563 771 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 ANKRD20A4Q4UJ75 823 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 SNAP47Q5SQN1 464 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 TMEM164Q5U3C3 297 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 KIAA0930Q6ICG6 404 aaPredicted RBP16.35■□□□□ 0.21
UBE3D-208ENST00000626828 HOOK3Q86VS8 718 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 C17orf53Q8N3J3 647 aaPredicted RBP16.35■□□□□ 0.21
UBE3D-208ENST00000626828 ZNF248Q8NDW4 579 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 GPR150Q8NGU9 434 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 ELMO1Q92556 727 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 ZDHHC12Q96GR4 267 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 SIGLEC10Q96LC7 697 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 FERD3LQ96RJ6 166 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 RAB33BQ9H082 229 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 OGFRQ9NZT2 677 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 MARCH4Q9P2E8 410 aaPredicted RBP16.35■□□□□ 0.21
UBE3D-208ENST00000626828 KMT2BQ9UMN6 2715 aaPredicted RBP16.35■□□□□ 0.21
UBE3D-208ENST00000626828 BPTFQ12830 3046 aa16.35■□□□□ 0.21
UBE3D-208ENST00000626828 PMS2P1A4D2B8 440 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 SMAPO00193 183 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 AGRPO00253 132 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 FANCGO15287 622 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 TOX3O15405 576 aaPredicted RBP16.34■□□□□ 0.21
UBE3D-208ENST00000626828 CAPN5O15484 640 aaPredicted RBP16.34■□□□□ 0.21
UBE3D-208ENST00000626828 C9P02748 559 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 IVDP26440 423 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 PDHA2P29803 388 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 SLC5A2P31639 672 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 MAGEA3P43357 314 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 ARCN1P48444 511 aaKnown RBP16.34■□□□□ 0.21
UBE3D-208ENST00000626828 MAPK10P53779 464 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 DHX34Q14147 1143 aaKnown RBP16.34■□□□□ 0.21
UBE3D-208ENST00000626828 LDB1Q86U70 411 aaPredicted RBP16.34■□□□□ 0.21
UBE3D-208ENST00000626828 TMEM135Q86UB9 458 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 LRRC6Q86X45 466 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 JAMLQ86YT9 394 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 TFGQ92734 400 aaPredicted RBP16.34■□□□□ 0.21
UBE3D-208ENST00000626828 C9orf72Q96LT7 481 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms