RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 SLITRK4Q8IW52 837 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 SFRP1Q8N474 314 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 AVL9Q8NBF6 648 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 GLYATL1Q969I3 302 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 SH3KBP1Q96B97 665 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 ARL8AQ96BM9 186 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 B3GNT4Q9C0J1 378 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 STN1Q9H668 368 aaKnown RBP12.45□□□□□ -0.42
PNKP-217ENST00000625216 TMBIM4Q9HC24 238 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 EURLQ9NYK6 297 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 ATXN10Q9UBB4 475 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 SLC2A6Q9UGQ3 507 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 ATXN7L1Q9ULK2 861 aaPredicted RBP12.45□□□□□ -0.42
PNKP-217ENST00000625216 RPS6KL1Q9Y6S9 549 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 ADAMTS20P59510 1910 aa12.45□□□□□ -0.42
PNKP-217ENST00000625216 HEATR9A2RTY3 570 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 FAM159BA6NKW6 160 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 CXorf49A8MYA2 514 aaPredicted RBP12.44□□□□□ -0.42
PNKP-217ENST00000625216 POC1B-GALNT4F8VUJ3 575 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 PPM1DO15297 605 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 NVLO15381 856 aaKnown RBP12.44□□□□□ -0.42
PNKP-217ENST00000625216 KLK10O43240 276 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 VEGFDO43915 354 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 JMJD7P0C870 316 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 ADRA1DP25100 572 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 KLHL38Q2WGJ6 581 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 KBTBD12Q3ZCT8 623 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 AMZ1Q400G9 498 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 TSTD2Q5T7W7 516 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 IYDQ6PHW0 289 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 GPR155Q7Z3F1 870 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.44□□□□□ -0.42
PNKP-217ENST00000625216 BRSK1Q8TDC3 778 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 BLOC1S5Q8TDH9 187 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 PATE1Q8WXA2 126 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 CERS2Q96G23 380 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 NAF1Q96HR8 494 aaKnown RBP12.44□□□□□ -0.42
PNKP-217ENST00000625216 VPS35Q96QK1 796 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 PAFAH2Q99487 392 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 DHRS4Q9BTZ2 278 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 SARS2Q9NP81 518 aaKnown RBP12.44□□□□□ -0.42
PNKP-217ENST00000625216 TREX1Q9NSU2 369 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 MOCS1Q9NZB8 636 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 SLC17A6Q9P2U8 582 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 ACSL6Q9UKU0 697 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 LOXL2Q9Y4K0 774 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 KCTD3Q9Y597 815 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 FAM169AQ9Y6X4 670 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 LRP4O75096 1905 aa12.44□□□□□ -0.42
PNKP-217ENST00000625216 IGHV1OR21-1A0A087WYE8 117 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 KIR2DS5A0A0G2JLQ3 304 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 A0A0G2JNG1 304 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 TEX51A0A1B0GUA7 166 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 TLDC2A0PJX2 215 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 MROH6A6NGR9 719 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 KIR2DS3K7RE56 304 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 RASGRF2O14827 1237 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 HGSO14964 777 aaPredicted RBP12.43□□□□□ -0.42
PNKP-217ENST00000625216 AURKAO14965 403 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 CHUKO15111 745 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 LDB2O43679 373 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 UGT1A9O60656 530 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 POLBP06746 335 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 ACP5P13686 325 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 ZNF8P17098 575 aaPredicted RBP12.43□□□□□ -0.42
PNKP-217ENST00000625216 ARNTP27540 789 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 TMPRSS3P57727 454 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 FRG1Q14331 258 aaKnown RBP12.43□□□□□ -0.42
PNKP-217ENST00000625216 KIR2DS5Q14953 304 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.43□□□□□ -0.42
PNKP-217ENST00000625216 PHF19Q5T6S3 580 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 ARMC3Q5W041 872 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 USP53Q70EK8 1073 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 ADGRG6Q86SQ4 1221 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 SLC9B2Q86UD5 537 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 TTC30BQ8N4P2 665 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 LSM14AQ8ND56 463 aaKnown RBP12.43□□□□□ -0.42
PNKP-217ENST00000625216 OR4D9Q8NGE8 314 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 SLC37A2Q8TED4 501 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 DCAKDQ8WVC6 231 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 UBL7Q96S82 380 aaPredicted RBP12.43□□□□□ -0.42
PNKP-217ENST00000625216 SLC38A3Q99624 504 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.43□□□□□ -0.42
PNKP-217ENST00000625216 ROPN1BQ9BZX4 212 aaPredicted RBP12.43□□□□□ -0.42
PNKP-217ENST00000625216 OR2AG1Q9H205 316 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 SEMA6CQ9H3T2 930 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 ROPN1Q9HAT0 212 aaPredicted RBP12.43□□□□□ -0.42
PNKP-217ENST00000625216 UGT1A7Q9HAW7 530 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 UGT1A10Q9HAW8 530 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 UGT1A8Q9HAW9 530 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 RDH14Q9HBH5 336 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 KCNK4Q9NYG8 393 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 TBC1D29Q9UFV1 150 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 LGALS13Q9UHV8 139 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 PRKAB1Q9Y478 270 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 ARL5AQ9Y689 179 aa12.43□□□□□ -0.42
PNKP-217ENST00000625216 MAGEB16A2A368 324 aa12.42□□□□□ -0.42
PNKP-217ENST00000625216 PMS2P1A4D2B8 440 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms