RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 EGFL8Q99944 293 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 HEPHQ9BQS7 1158 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 TMEM79Q9BSE2 394 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 CD244Q9BZW8 370 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 TMEM45AQ9NWC5 275 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 GID8Q9NWU2 228 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 RIMS3Q9UJD0 308 aa19.38■□□□□ 0.69
PCDHB11-202ENST00000624887 A0A1W2PP18 115 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 LINC01553A4QN01 128 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 EIF4E1BA6NMX2 242 aaKnown RBP19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 C9JVG2 144 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 FXYD1O00168 92 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 EIF3FO00303 357 aaPredicted RBP19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 SLC22A3O75751 556 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 SMNDC1O75940 238 aaKnown RBP eCLIP19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 ZNF30P17039 623 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 ZFP36L2P47974 494 aaKnown RBP19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 C6orf10Q5SRN2 563 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 NAT16Q8N8M0 369 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 MYLIPQ8WY64 445 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 GATA6Q92908 595 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 LRCH3Q96II8 777 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 MRGPRX3Q96LB0 322 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 TEX37Q96LM6 180 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 LRGUKQ96M69 825 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 WWOXQ9NZC7 414 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 PKD2L2Q9NZM6 624 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 ZIM2Q9NZV7 527 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 SYNCRIPO60506 623 aaKnown RBP19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 OR56A5P0C7T3 313 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 CCR7P32248 378 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 HTR6P50406 440 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 AQP4P55087 323 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 KCNK10P57789 538 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 RHDQ02161 417 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 ARHGEF7Q14155 803 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 IL27RAQ6UWB1 636 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 MILR1Q7Z6M3 343 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 LILRA2Q8N149 483 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 SFRP1Q8N474 314 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 FNDC5Q8NAU1 212 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 ABCG8Q9H221 673 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 EBF3Q9H4W6 596 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 OPTCQ9UBM4 332 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 TMPRSS11EQ9UL52 423 aa19.37■□□□□ 0.69
PCDHB11-202ENST00000624887 C5orf67F2Z3F1 127 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 SLC9A3R1O14745 358 aaPredicted RBP19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 UFM1P61960 85 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 FOXM1Q08050 763 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 MAP7D1Q3KQU3 841 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 GRAMD1BQ3KR37 738 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 RARS2Q5T160 578 aaKnown RBP19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 CYB5D2Q8WUJ1 264 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 LRRC58Q96CX6 371 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 C1orf50Q9BV19 199 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 COPS7BQ9H9Q2 264 aaPredicted RBP19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 IL1RL2Q9HB29 575 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 HEBP1Q9NRV9 189 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 MYO7AQ13402 2215 aa19.36■□□□□ 0.69
PCDHB11-202ENST00000624887 A6NHS1 94 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 TTC34A8MYJ7 566 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 K7EPI3 171 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 NME4O00746 187 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 ZNF197O14709 1029 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 KATNA1O75449 491 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 LEFTY1O75610 366 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 CYP2A6P11509 494 aaPredicted RBP19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 CEBPBP17676 345 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 AOAHP28039 575 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 VIPR1P32241 457 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 NNMTP40261 264 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 CDKL4Q5MAI5 379 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 SPRED2Q7Z698 418 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 SORCS1Q8WY21 1168 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 ING5Q8WYH8 240 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 DUS3LQ96G46 650 aaKnown RBP19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 SMOXQ9NWM0 555 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 FBXO10Q9UK96 956 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 DTNAQ9Y4J8 743 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 ANGPTL3Q9Y5C1 460 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 TCRBV3S1A0A5B6 114 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 TSPAN11A1L157 253 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 MAGEA13PA6NCF6 341 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 LSM1O15116 133 aaKnown RBP19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 CAPNS1P04632 268 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 UQCRBP14927 111 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 MSH3P20585 1137 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 HMOX2P30519 316 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 GDF5P43026 501 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 EMX2Q04743 252 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 GBX1Q14549 363 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 CBX2Q14781 532 aaPredicted RBP19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 ABRAXAS2Q15018 415 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 ZNF697Q5TEC3 545 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 TMEM154Q6P9G4 183 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 RNF165Q6ZSG1 346 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 SLC15A3Q8IY34 581 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 SLC45A3Q96JT2 553 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 BTBD9Q96Q07 612 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 PKP2Q99959 881 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms