RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 LGALS13Q9UHV8 139 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 SLC39A10Q9ULF5 831 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 DHRS7Q9Y394 339 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 PCDHGB2Q9Y5G2 931 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 TLDC2A0PJX2 215 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 H3BM21 787 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 VCLP18206 1134 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 AOAHP28039 575 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 CLCNKAP51800 687 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 BNIP3Q12983 259 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 SUZ12Q15022 739 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 INSCQ1MX18 579 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 PLA2G4EQ3MJ16 856 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 KRT71Q3SY84 523 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 CEP85LQ5SZL2 805 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 OTOAQ7RTW8 1153 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 CD200R1Q8TD46 325 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 MZB1Q8WU39 189 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 ELMO1Q92556 727 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 GPR21Q99679 349 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 CAAP1Q9H8G2 361 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 GALPQ9UBC7 116 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 TBK1Q9UHD2 729 aa19.47■□□□□ 0.71
PDLIM2-221ENST00000622702 TRIM49D1C9J1S8 452 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 MAP2K7O14733 419 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 LIN7AO14910 233 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 YKT6O15498 198 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 SH3BP5O60239 455 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 PCDHGA12O60330 932 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 ALDOAP04075 364 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 STMN1P16949 149 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 EPHA8P29322 1005 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 PBLDP30039 288 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 CSRP3P50461 194 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 SLC12A2P55011 1212 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 CTBSQ01459 385 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 XKR5Q6UX68 686 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 TIFABQ6ZNK6 161 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 PIM3Q86V86 326 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 GATAD2AQ86YP4 633 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 CEP97Q8IW35 865 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 ZBTB2Q8N680 514 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 GIMAP7Q8NHV1 300 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 GPBAR1Q8TDU6 330 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 SAP25Q8TEE9 199 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 SETD7Q8WTS6 366 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 ASZ1Q8WWH4 475 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 INPP5DQ92835 1189 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 FAM136AQ96C01 138 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 LRRC61Q9BV99 259 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 COG4Q9H9E3 785 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 CAB39LQ9H9S4 337 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 KLC4Q9NSK0 619 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 TRMT6Q9UJA5 497 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 PLEKHM1Q9Y4G2 1056 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 ST14Q9Y5Y6 855 aa19.46■□□□□ 0.71
PDLIM2-221ENST00000622702 SLC5A10A0PJK1 596 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 SCAMP1O15126 338 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 SDC3O75056 442 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 GPC4O75487 556 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 APOA4P06727 396 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 CTSEP14091 401 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 SAT1P21673 171 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 MAGEA12P43365 314 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 SERPINB8P50452 374 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 RAB10P61026 200 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 PLOD1Q02809 727 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 ILF3Q12906 894 aaKnown RBP eCLIP19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 RPA4Q13156 261 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 PDAP1Q13442 181 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 GBX1Q14549 363 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 TMED2Q15363 201 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 TTLL9Q3SXZ7 439 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 PLEKHS1Q5SXH7 462 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 METRNLQ641Q3 311 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 DBX2Q6ZNG2 339 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 PIP4P1Q86T03 277 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 NAXDQ8IW45 347 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 FSTL5Q8N475 847 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 SIDT2Q8NBJ9 832 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 DEFB124Q8NES8 71 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 CAMK1GQ96NX5 476 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 SLC30A3Q99726 388 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 GSDMCQ9BYG8 508 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 SARS2Q9NP81 518 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 ZNF446Q9NWS9 450 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 SPASTQ9UBP0 616 aa19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 TDRD6O60522 2096 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-221ENST00000622702 PIAS2O75928 621 aa19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 SLCO2B1O94956 709 aa19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 WISP3O95389 354 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 CRABP2P29373 138 aa19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 BOP1Q14137 746 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 NFE2L1Q14494 772 aa19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 ELOCQ15369 112 aa19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 PRRT3Q5FWE3 981 aa19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 FAM83HQ6ZRV2 1179 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 CCDC91Q7Z6B0 441 aa19.44■□□□□ 0.7
PDLIM2-221ENST00000622702 CMC1Q7Z7K0 106 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms