RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 DDX28Q9NUL7 540 aaKnown RBP12.86□□□□□ -0.35
CHD1L-210ENST00000622533 C17orf102A2RUQ5 167 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 M0QX08 132 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 HAS3O00219 553 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 CCRL2O00421 344 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 CRCPO75575 148 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 ENDOUP21128 410 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 FMO3P31513 532 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 LCP2Q13094 533 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 HABP4Q5JVS0 413 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 P2RY8Q86VZ1 359 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 DCP2Q8IU60 420 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 ZDHHC13Q8IUH4 622 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 MCOLN3Q8TDD5 553 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 FRS2Q8WU20 508 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 NSMCE2Q96MF7 247 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 ASPSCR1Q9BZE9 553 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 SLIRPQ9GZT3 109 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 SYTL2Q9HCH5 934 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 SSX4O60224 188 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 CNTN5O94779 1100 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 PARNO95453 639 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 CYP11A1P05108 521 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 ACVR1Q04771 509 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 PLA2G4EQ3MJ16 856 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 NOMO2Q5JPE7 1267 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 TTC23Q5W5X9 447 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 RYBPQ8N488 228 aaPredicted RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 OR52K2Q8NGK3 314 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 MCFD2Q8NI22 146 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 PHF10Q8WUB8 498 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 NSUN5Q96P11 429 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 GAD1Q99259 594 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 TUBB1Q9H4B7 451 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 CARS2Q9HA77 564 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 SLC52A3Q9NQ40 469 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 FAM105AQ9NUU6 356 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 NDFIP2Q9NV92 336 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 POLR3BQ9NW08 1133 aaPredicted RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 ADPRHL2Q9NX46 363 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 POLG2Q9UHN1 485 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 LEF1Q9UJU2 399 aaPredicted RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 HS3ST4Q9Y661 456 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 GRXCR2A6NFK2 248 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 M0QZ92 97 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 EEDO75530 441 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 PEX11BO96011 259 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 OGNP20774 298 aaKnown RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 IGFBP6P24592 240 aaPredicted RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 MLLT6P55198 1093 aaPredicted RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 RCAN2Q14206 197 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 PFKFB4Q16877 469 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 SNAP47Q5SQN1 464 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 TTC23LQ6PF05 361 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 CCBE1Q6UXH8 406 aaPredicted RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 LDB1Q86U70 411 aaPredicted RBP12.85□□□□□ -0.35
CHD1L-210ENST00000622533 PLD3Q8IV08 490 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 SYTL1Q8IYJ3 562 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 STAG3L4Q8TBR4 150 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 NUDT8Q8WV74 236 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 DMRTB1Q96MA1 342 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 YME1L1Q96TA2 773 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 SP110Q9HB58 689 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 FBXO10Q9UK96 956 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 RIMKLBQ9ULI2 386 aa12.85□□□□□ -0.35
CHD1L-210ENST00000622533 MIA3Q5JRA6 1907 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 A0A1B0GTL3 188 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 UBXN8O00124 270 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 PDHXO00330 501 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 KERAO60938 352 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 ZNF37AP17032 561 aaPredicted RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 RHOQP17081 205 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 CPT1AP50416 773 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 MRPS15P82914 257 aaKnown RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 UPP1Q16831 310 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 TIGD5Q53EQ6 642 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 SCIMPQ6UWF3 145 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 THEM5Q8N1Q8 247 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 BEND7Q8N7W2 519 aaPredicted RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 AURKBQ96GD4 344 aaPredicted RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 SPATA17Q96L03 361 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 ZNF300Q96RE9 604 aaPredicted RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 RTP3Q9BQQ7 232 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 C6orf62Q9GZU0 229 aaPredicted RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 NECTIN3Q9NQS3 549 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 MOSPD1Q9UJG1 213 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 GPR45Q9Y5Y3 372 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 NYNRINQ9P2P1 1898 aaKnown RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 CD3EAPO15446 510 aaKnown RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 HS6ST1O60243 411 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 DDNO94850 711 aaPredicted RBP12.84□□□□□ -0.35
CHD1L-210ENST00000622533 C1RP00736 705 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 SLC4A1P02730 911 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 CYBBP04839 570 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 HTR1EP28566 365 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 GABARAPL2P60520 117 aa12.84□□□□□ -0.35
CHD1L-210ENST00000622533 ISL1P61371 349 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms